(5 nodes) Polyketide synthase, dehydratase domain superfamily, and Thioesterase domain network (Streptomyces cyaneogriseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJP05428.1	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
	AJP00314.1	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1947 aa)
	AJP00635.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1799 aa)
	AJP04705.1	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2470 aa)
	AJP06017.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2396 aa)

Your Current Organism:

Streptomyces cyaneogriseus

NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJP00314.1	AJP00635.1	TU94_00870	TU94_03030	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJP00314.1	AJP04705.1	TU94_00870	TU94_27865	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJP00314.1	AJP05428.1	TU94_00870	TU94_00865	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP00314.1	AJP06017.1	TU94_00870	TU94_32375	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP00635.1	AJP00314.1	TU94_03030	TU94_00870	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJP00635.1	AJP04705.1	TU94_03030	TU94_27865	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AJP00635.1	AJP05428.1	TU94_03030	TU94_00865	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJP00635.1	AJP06017.1	TU94_03030	TU94_32375	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP04705.1	AJP00314.1	TU94_27865	TU94_00870	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJP04705.1	AJP00635.1	TU94_27865	TU94_03030	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AJP04705.1	AJP05428.1	TU94_27865	TU94_00865	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP04705.1	AJP06017.1	TU94_27865	TU94_32375	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP05428.1	AJP00314.1	TU94_00865	TU94_00870	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP05428.1	AJP00635.1	TU94_00865	TU94_03030	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJP05428.1	AJP04705.1	TU94_00865	TU94_27865	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP05428.1	AJP06017.1	TU94_00865	TU94_32375	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP06017.1	AJP00314.1	TU94_32375	TU94_00870	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP06017.1	AJP00635.1	TU94_32375	TU94_03030	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP06017.1	AJP04705.1	TU94_32375	TU94_27865	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJP06017.1	AJP05428.1	TU94_32375	TU94_00865	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999