STRINGSTRING
AJP00913.1 AJP00913.1 AJP01636.1 AJP01636.1 thiE thiE AJP01639.1 AJP01639.1 AJP01641.1 AJP01641.1 AJP01642.1 AJP01642.1 AJP01643.1 AJP01643.1 thiG thiG thiC thiC AJP03711.1 AJP03711.1 rsgA rsgA AJP03714.1 AJP03714.1 AJP03715.1 AJP03715.1 AJP05811.1 AJP05811.1 AJP05812.1 AJP05812.1 AJP03716.1 AJP03716.1 thiL thiL AJP03998.1 AJP03998.1 rsgA-2 rsgA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJP00913.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
AJP01636.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
thiEThiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (218 aa)
AJP01639.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
AJP01641.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
AJP01642.1Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
AJP01643.1Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)
thiGThiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. (264 aa)
thiCPhosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. (597 aa)
AJP03711.1Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
rsgAGTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (336 aa)
AJP03714.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
AJP03715.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (272 aa)
AJP05811.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
AJP05812.1RNA polymerase sigma factor RpoE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (227 aa)
AJP03716.1Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
thiLThiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. (322 aa)
AJP03998.1Phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
rsgA-2GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (375 aa)
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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