(70 nodes) ABC transporter type 1, transmembrane domain MetI-like network (Streptomyces cyaneogriseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJP05963.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	AJP04876.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AJP04875.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
	AJP04600.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	AJP05472.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AJP04599.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	AJP01220.1	Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (871 aa)
	AJP04564.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	AJP04563.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	AJP04421.1	Sulfate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	AJP04417.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AJP04416.1	Transporter integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AJP05888.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	AJP04393.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	AJP04326.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	AJP04325.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	AJP04152.1	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	AJP04151.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AJP01443.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	AJP01444.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AJP01732.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	AJP01733.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
	AJP01876.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AJP01877.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AJP02148.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	AJP05859.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	AJP04100.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	AJP03633.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
	AJP02149.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	AJP02164.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AJP02165.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	AJP02236.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	AJP02226.1	Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	AJP02225.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
	AJP04077.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	AJP04076.1	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	AJP04067.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	AJP04066.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AJP04045.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
	AJP03921.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	AJP03919.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	AJP03881.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AJP05840.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AJP03751.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AJP03728.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	AJP05816.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	AJP01150.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	AJP01151.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	AJP01170.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
	AJP03632.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	AJP05804.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	AJP03629.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AJP03439.1	Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa)
	AJP03037.1	Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (334 aa)
	AJP03036.1	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
	AJP02259.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	AJP05671.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	AJP05666.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AJP00609.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
	AJP00708.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	AJP00709.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	AJP00772.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AJP01020.1	Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (294 aa)
	AJP05383.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
	AJP06007.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	AJP05349.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	AJP05348.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	AJP05187.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
	AJP05186.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	AJP05173.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)

Your Current Organism:

Streptomyces cyaneogriseus

NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJP00609.1	AJP00709.1	TU94_02835	TU94_03590	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
AJP00609.1	AJP01151.1	TU94_02835	TU94_06365	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.840
AJP00609.1	AJP01444.1	TU94_02835	TU94_08040	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.823
AJP00609.1	AJP01733.1	TU94_02835	TU94_09640	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
AJP00609.1	AJP01877.1	TU94_02835	TU94_10480	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
AJP00609.1	AJP02149.1	TU94_02835	TU94_12270	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
AJP00609.1	AJP03881.1	TU94_02835	TU94_22820	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
AJP00609.1	AJP04076.1	TU94_02835	TU94_23975	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJP00609.1	AJP04325.1	TU94_02835	TU94_25535	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
AJP00609.1	AJP04416.1	TU94_02835	TU94_26090	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.844
AJP00609.1	AJP04564.1	TU94_02835	TU94_27010	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
AJP00609.1	AJP04599.1	TU94_02835	TU94_27230	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
AJP00609.1	AJP04876.1	TU94_02835	TU94_28950	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
AJP00609.1	AJP05349.1	TU94_02835	TU94_31960	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
AJP00609.1	AJP05383.1	TU94_02835	TU94_32195	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
AJP00609.1	AJP05472.1	TU94_02835	TU94_02830	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
AJP00609.1	AJP05666.1	TU94_02835	TU94_12835	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.543
AJP00609.1	AJP05671.1	TU94_02835	TU94_12980	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
AJP00609.1	AJP05816.1	TU94_02835	TU94_21820	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
AJP00708.1	AJP00709.1	TU94_03585	TU94_03590	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980