(8 nodes) Polyketide synthase, dehydratase domain superfamily network (Streptomyces cyaneogriseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJP04992.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4963 aa)
	AJP00314.1	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1947 aa)
	AJP00629.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2763 aa)
	AJP05474.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2853 aa)
	AJP00635.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1799 aa)
	AJP00639.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2096 aa)
	AJP03826.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3943 aa)
	AJP04705.1	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2470 aa)

Your Current Organism:

Streptomyces cyaneogriseus

NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJP00314.1	AJP00629.1	TU94_00870	TU94_02960	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
AJP00314.1	AJP00635.1	TU94_00870	TU94_03030	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJP00314.1	AJP00639.1	TU94_00870	TU94_03065	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AJP00314.1	AJP03826.1	TU94_00870	TU94_22465	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
AJP00314.1	AJP04705.1	TU94_00870	TU94_27865	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJP00314.1	AJP04992.1	TU94_00870	TU94_29680	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AJP00314.1	AJP05474.1	TU94_00870	TU94_02970	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
AJP00629.1	AJP00314.1	TU94_02960	TU94_00870	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
AJP00629.1	AJP00635.1	TU94_02960	TU94_03030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AJP00629.1	AJP00639.1	TU94_02960	TU94_03065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
AJP00629.1	AJP03826.1	TU94_02960	TU94_22465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
AJP00629.1	AJP04705.1	TU94_02960	TU94_27865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
AJP00629.1	AJP04992.1	TU94_02960	TU94_29680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
AJP00629.1	AJP05474.1	TU94_02960	TU94_02970	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AJP00635.1	AJP00314.1	TU94_03030	TU94_00870	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJP00635.1	AJP00629.1	TU94_03030	TU94_02960	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AJP00635.1	AJP00639.1	TU94_03030	TU94_03065	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
AJP00635.1	AJP03826.1	TU94_03030	TU94_22465	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJP00635.1	AJP04705.1	TU94_03030	TU94_27865	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NRPS-type-I PKS fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AJP00635.1	AJP04992.1	TU94_03030	TU94_29680	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.719