(8 nodes) NADP oxidoreductase coenzyme F420-dependent network (Streptomyces cyaneogriseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJP03074.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	AJP05834.1	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	AJP04510.1	Tartronate semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AJP01287.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	AJP01768.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	AJP01777.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
	AJP04640.1	3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (601 aa)
	AJP04547.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)

Your Current Organism:

Streptomyces cyaneogriseus

NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJP01777.1	AJP04547.1	TU94_09890	TU94_26905	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
AJP03074.1	AJP04510.1	TU94_17920	TU94_26700	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tartronate semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
AJP04510.1	AJP03074.1	TU94_26700	TU94_17920	Tartronate semialdehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.432
AJP04547.1	AJP01777.1	TU94_26905	TU94_09890	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472