(5 nodes) Erythronolide synthase docking domain network (Streptomyces cyaneogriseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJP00639.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2096 aa)
	AJP00635.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1799 aa)
	AJP03826.1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3943 aa)
	AJP03825.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4798 aa)
	AJP00667.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (135 aa)

Your Current Organism:

Streptomyces cyaneogriseus

NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJP00635.1	AJP00639.1	TU94_03030	TU94_03065	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
AJP00635.1	AJP00667.1	TU94_03030	TU94_03295	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.927
AJP00635.1	AJP03825.1	TU94_03030	TU94_22460	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AJP00635.1	AJP03826.1	TU94_03030	TU94_22465	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJP00639.1	AJP00635.1	TU94_03065	TU94_03030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
AJP00639.1	AJP00667.1	TU94_03065	TU94_03295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.949
AJP00639.1	AJP03825.1	TU94_03065	TU94_22460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
AJP00639.1	AJP03826.1	TU94_03065	TU94_22465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.810
AJP00667.1	AJP00635.1	TU94_03295	TU94_03030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AJP00667.1	AJP00639.1	TU94_03295	TU94_03065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AJP00667.1	AJP03825.1	TU94_03295	TU94_22460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AJP00667.1	AJP03826.1	TU94_03295	TU94_22465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
AJP03825.1	AJP00635.1	TU94_22460	TU94_03030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
AJP03825.1	AJP00639.1	TU94_22460	TU94_03065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
AJP03825.1	AJP00667.1	TU94_22460	TU94_03295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.949
AJP03825.1	AJP03826.1	TU94_22460	TU94_22465	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AJP03826.1	AJP00635.1	TU94_22465	TU94_03030	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJP03826.1	AJP00639.1	TU94_22465	TU94_03065	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.810
AJP03826.1	AJP00667.1	TU94_22465	TU94_03295	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.806
AJP03826.1	AJP03825.1	TU94_22465	TU94_22460	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958