Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJP00282.1 | AJP00512.1 | TU94_00660 | TU94_02155 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.900 |
| AJP00282.1 | AJP02803.1 | TU94_00660 | TU94_16295 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
| AJP00282.1 | AJP02805.1 | TU94_00660 | TU94_16305 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
| AJP00282.1 | AJP02806.1 | TU94_00660 | TU94_16310 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylacetic acid degradation protein PaaD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.920 |
| AJP00282.1 | AJP02807.1 | TU94_00660 | TU94_16315 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AJP00282.1 | AJP04536.1 | TU94_00660 | TU94_26840 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family. | 0.902 |
| AJP00282.1 | AJP05953.1 | TU94_00660 | TU94_29810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-aminohexanoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family. | 0.904 |
| AJP00282.1 | paaB | TU94_00660 | TU94_16300 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| AJP00512.1 | AJP00282.1 | TU94_02155 | TU94_00660 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AJP00512.1 | AJP02803.1 | TU94_02155 | TU94_16295 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AJP00512.1 | AJP02805.1 | TU94_02155 | TU94_16305 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AJP00512.1 | AJP02806.1 | TU94_02155 | TU94_16310 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein PaaD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| AJP00512.1 | AJP02807.1 | TU94_02155 | TU94_16315 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.980 |
| AJP00512.1 | AJP04536.1 | TU94_02155 | TU94_26840 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family. | 0.902 |
| AJP00512.1 | AJP05953.1 | TU94_02155 | TU94_29810 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 6-aminohexanoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family. | 0.906 |
| AJP00512.1 | paaB | TU94_02155 | TU94_16300 | phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| AJP01197.1 | AJP02524.1 | TU94_06630 | TU94_14545 | 3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| AJP01197.1 | AJP05328.1 | TU94_06630 | TU94_31805 | 3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.761 |
| AJP01345.1 | AJP04412.1 | TU94_07475 | TU94_26070 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Copper amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
| AJP01345.1 | AJP05400.1 | TU94_07475 | TU94_32340 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flavin-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
page 1 of 8