STRINGSTRING
CCH85537.1 CCH85537.1 CCH85549.1 CCH85549.1 CCH85550.1 CCH85550.1 CCH85554.1 CCH85554.1 CCH85629.1 CCH85629.1 CCH85645.1 CCH85645.1 CCH85669.1 CCH85669.1 CCH85734.1 CCH85734.1 CCH85735.1 CCH85735.1 CCH85739.1 CCH85739.1 CCH85740.1 CCH85740.1 cheD cheD CCH85754.1 CCH85754.1 CCH85755.1 CCH85755.1 CCH85779.1 CCH85779.1 CCH85780.1 CCH85780.1 CCH85821.1 CCH85821.1 CCH85851.1 CCH85851.1 CCH85859.1 CCH85859.1 CCH85860.1 CCH85860.1 CCH86169.1 CCH86169.1 CCH86306.1 CCH86306.1 CCH86461.1 CCH86461.1 flhA flhA CCH86464.1 CCH86464.1 fliR fliR fliQ fliQ fliP fliP fliO fliO fliN fliN fliM fliM fliL fliL motB motB motA motA flbD flbD flgE flgE flgD flgD CCH86477.1 CCH86477.1 fliJ fliJ fliI fliI fliH fliH fliG fliG fliF fliF fliE fliE flgC flgC flgB flgB fliS fliS fliD fliD fliC fliC fliA fliA flgN flgN flgK flgK figL figL csrA csrA CCH86497.1 CCH86497.1 CCH86683.1 CCH86683.1 CCH86719.1 CCH86719.1 CCH86724.1 CCH86724.1 CCH86863.1 CCH86863.1 CCH86872.1 CCH86872.1 CCH86877.1 CCH86877.1 CCH86925.1 CCH86925.1 CCH86926.1 CCH86926.1 CCH86986.1 CCH86986.1 CCH87203.1 CCH87203.1 CCH87322.1 CCH87322.1 CCH87331.1 CCH87331.1 CCH87345.1 CCH87345.1 CCH87356.1 CCH87356.1 CCH87436.1 CCH87436.1 trxB trxB CCH87488.1 CCH87488.1 sigF sigF CCH87504.1 CCH87504.1 CCH87506.1 CCH87506.1 CCH87562.1 CCH87562.1 CCH87563.1 CCH87563.1 CCH87759.1 CCH87759.1 CCH88045.1 CCH88045.1 CCH88150.1 CCH88150.1 CCH88302.1 CCH88302.1 CCH88306.1 CCH88306.1 CCH88308.1 CCH88308.1 CCH88310.1 CCH88310.1 CCH88423.1 CCH88423.1 CCH88467.1 CCH88467.1 CCH88507.1 CCH88507.1 CCH88508.1 CCH88508.1 CCH88547.1 CCH88547.1 CCH88548.1 CCH88548.1 CCH88635.1 CCH88635.1 CCH88668.1 CCH88668.1 CCH88922.1 CCH88922.1 CCH89092.1 CCH89092.1 CCH89099.1 CCH89099.1 CCH89100.1 CCH89100.1 CCH89171.1 CCH89171.1 CCH89172.1 CCH89172.1 CCH89177.1 CCH89177.1 CCH89182.1 CCH89182.1 CCH89184.1 CCH89184.1 CCH89209.1 CCH89209.1 CCH89210.1 CCH89210.1 CCH89234.1 CCH89234.1 CCH89235.1 CCH89235.1 CCH89237.1 CCH89237.1 CCH89238.1 CCH89238.1 CCH89243.1 CCH89243.1 CCH89255.1 CCH89255.1 CCH89434.1 CCH89434.1 CCH89435.1 CCH89435.1 CCH89654.1 CCH89654.1 CCH89663.1 CCH89663.1 CCH89864.1 CCH89864.1 CCH89865.1 CCH89865.1 CCH89914.1 CCH89914.1 CCH89957.1 CCH89957.1 CCH90238.1 CCH90238.1 CCH90323.1 CCH90323.1 CCH90356.1 CCH90356.1 CCH90514.1 CCH90514.1 CCH90658.1 CCH90658.1 CCH90696.1 CCH90696.1 CCH90797.1 CCH90797.1 CCH90800.1 CCH90800.1 CCH90824.1 CCH90824.1 CCH90882.1 CCH90882.1 cheY cheY CCH90884.1 CCH90884.1 cheY-2 cheY-2 cheR cheR cheB cheB CCH90889.1 CCH90889.1 CCH90890.1 CCH90890.1 cheW cheW CCH90892.1 CCH90892.1 CCH90899.1 CCH90899.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCH85537.1Sensor phosphatase; Function of strongly homologous gene; enzyme. (639 aa)
CCH85549.1Signal transduction histidine kinase; Function of strongly homologous gene; enzyme. (161 aa)
CCH85550.1Anti-sigma factor antagonist (fragment); Function of strongly homologous gene; factor. (100 aa)
CCH85554.1Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme. (848 aa)
CCH85629.1Putative Diguanylate cyclase/phosphodiesterase with GAF sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (404 aa)
CCH85645.1Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme. (355 aa)
CCH85669.1Diguanylate cyclase/phosphodiesterase (fragment); Function of strongly homologous gene; enzyme. (506 aa)
CCH85734.1Diguanylate cyclase with PAS/PAC sensor (fragment); Function of strongly homologous gene; enzyme. (187 aa)
CCH85735.1Diguanylate kinase; Function of strongly homologous gene; enzyme. (509 aa)
CCH85739.1Diguanylate cyclase; Function of strongly homologous gene; enzyme. (961 aa)
CCH85740.1Diguanylate cyclase (GGDEF) domain-containing protein; Function of strongly homologous gene; enzyme. (584 aa)
cheDChemotaxis sensory transducer; Function of strongly homologous gene; regulator. (535 aa)
CCH85754.1Methyl-accepting chemotaxis transducer/sensory box protein; Function of strongly homologous gene; receptor. (693 aa)
CCH85755.1Chemotaxis CheW protein, Positive regulator of CheA protein activity; Function of strongly homologous gene; regulator. (503 aa)
CCH85779.1Diguanylate phosphodiesterase, EAL domain-containing protein; Function of strongly homologous gene; enzyme. (363 aa)
CCH85780.1Serine phosphatase RsbU, regulator of sigma subunit (modular protein); Function of strongly homologous gene; enzyme. (877 aa)
CCH85821.1Diguanylate cyclase; Function of strongly homologous gene; enzyme. (326 aa)
CCH85851.1Putative signal-transducer protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (167 aa)
CCH85859.1Putative Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor. (871 aa)
CCH85860.1Putative Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (892 aa)
CCH86169.1Diguanylate cyclase (GGDEF); Function of strongly homologous gene; enzyme. (782 aa)
CCH86306.1Diguanylate kinase; Function of strongly homologous gene; enzyme. (675 aa)
CCH86461.1Protein of unknown function; No homology to any previously reported sequences. (1013 aa)
flhAFlagellar export pore protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (680 aa)
CCH86464.1Flagellar biosynthesis pathway, component FlhB; Function of homologous gene experimentally demonstrated in an other organism; structure. (376 aa)
fliRFlagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (254 aa)
fliQFlagellar biosynthetic protein fliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (91 aa)
fliPFlagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (287 aa)
fliOFlagellar protein flio; Function of strongly homologous gene; structure. (150 aa)
fliNFlagellar motor switch/type III secretory pathway protein; Function of strongly homologous gene; structure. (248 aa)
fliMFlagellar motor switch protein; Function of strongly homologous gene; structure. (324 aa)
fliLFlagellar basal body-associated protein; Function of strongly homologous gene; structure. (157 aa)
motBFlagellar motor protein B; Function of strongly homologous gene; structure. (338 aa)
motAFlagellar motor protein A; Function of strongly homologous gene; structure. (256 aa)
flbDFlagellar FlbD protein; Function of strongly homologous gene; structure. (95 aa)
flgEFlagellar hook protein flgE; Function of strongly homologous gene; structure. (418 aa)
flgDFlagellar hook capping protein; Function of strongly homologous gene; structure. (146 aa)
CCH86477.1Flagellar hook-length control protein; Function of strongly homologous gene; cell process. (453 aa)
fliJFlagellar export protein FliJ; Function of strongly homologous gene; structure. (151 aa)
fliIFlagellum-specific ATP synthase; Function of strongly homologous gene; enzyme. (438 aa)
fliHFlagellar biosynthesis/type III secretory pathway protein; Function of strongly homologous gene; structure. (292 aa)
fliGFlagellar motor switch protein fliG; Function of strongly homologous gene; structure. (357 aa)
fliFFlagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (518 aa)
fliEFlagellar hook-basal body complex protein fliE; Function of strongly homologous gene; structure. (113 aa)
flgCFlagellar basal body rod protein; Function of strongly homologous gene; structure; Belongs to the flagella basal body rod proteins family. (134 aa)
flgBFlagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (115 aa)
fliSFlagellar protein FliS; Function of strongly homologous gene; structure. (128 aa)
fliDFlagellar hook-associated 2 protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (471 aa)
fliCA-type flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (382 aa)
fliARNA polymerase, sigma 28 subunit for flagellar operon; Function of strongly homologous gene; factor; Belongs to the sigma-70 factor family. (310 aa)
flgNFlgN protein; Function of homologous gene experimentally demonstrated in an other organism; structure. (161 aa)
flgKFlagellar hook-associated protein FlgK; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family. (480 aa)
figLFlagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (302 aa)
csrACarbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (87 aa)
CCH86497.1Homologs of previously reported genes of unknown function. (369 aa)
CCH86683.1Diguanylate cyclase (GGDEF) with PAS domain; Function of strongly homologous gene; receptor. (592 aa)
CCH86719.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function of strongly homologous gene; receptor. (704 aa)
CCH86724.1Homologs of previously reported genes of unknown function. (169 aa)
CCH86863.1Diguanylate phosphodiesterase; Function of strongly homologous gene; receptor. (359 aa)
CCH86872.1Putative anti-sigma regulatory factor, serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (316 aa)
CCH86877.1Bacteriophytochrome (Light-regulated signal transduction histidine kinase); Function of strongly homologous gene; enzyme. (747 aa)
CCH86925.1PAS domain S-box/diguanylate cyclase (GGDEF) (modular protein); Function of strongly homologous gene; enzyme. (777 aa)
CCH86926.1Sulphate transporter/antisigma-factor antagonist STAS; Function of strongly homologous gene; factor. (133 aa)
CCH86986.1Homologs of previously reported genes of unknown function. (222 aa)
CCH87203.1Methyl-accepting chemotaxis sensory transducer; Function of strongly homologous gene; receptor. (519 aa)
CCH87322.1Diguanylate cyclase/phosphodiesterase; Function of strongly homologous gene; enzyme. (764 aa)
CCH87331.1Diguanylate cyclase (GGDEF); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (371 aa)
CCH87345.1Methyl-accepting chemotaxis sensory transducer; Function of strongly homologous gene; cell process. (518 aa)
CCH87356.1Putative Diguanylate cyclase/phosphodiesterase with GAF sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (415 aa)
CCH87436.1Diguanylate phosphodiesterase; Function of strongly homologous gene; enzyme. (444 aa)
trxBTwo component thioredoxin reductase carring response regulator; Function of strongly homologous gene; enzyme. (532 aa)
CCH87488.1Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme. (448 aa)
sigFRNA polymerase sigma-F factor; Function of strongly homologous gene; factor; Belongs to the sigma-70 factor family. (311 aa)
CCH87504.1Putative anti-sigma regulatory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (166 aa)
CCH87506.1Anti-anti-sigma factor; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the anti-sigma-factor antagonist family. (132 aa)
CCH87562.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function of strongly homologous gene; receptor. (697 aa)
CCH87563.1Putative signal transduction protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (277 aa)
CCH87759.1Diguanylate cyclase with PAS/PAC sensor (fragment); Function of strongly homologous gene; receptor. (295 aa)
CCH88045.1Homologs of previously reported genes of unknown function. (228 aa)
CCH88150.1Protein serine/threonine phosphatase; Function of strongly homologous gene; enzyme. (441 aa)
CCH88302.1Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (148 aa)
CCH88306.1Putative Diguanylate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (306 aa)
CCH88308.1Two component signal transduction serine/threonine kinase; Function of strongly homologous gene; regulator. (314 aa)
CCH88310.1Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (625 aa)
CCH88423.1Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (542 aa)
CCH88467.1Sulphate transporter/antisigma-factor antagonist STAS; Function of strongly homologous gene; factor. (238 aa)
CCH88507.1Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (250 aa)
CCH88508.1Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (515 aa)
CCH88547.1Two component sensory transduction histidine kinase with PAS/PAC sensory domains (fragment); Function of strongly homologous gene; enzyme. (862 aa)
CCH88548.1Two component sensory transduction histidine kinase with PAS/PAC sensory domains (fragment); Function of strongly homologous gene; enzyme. (163 aa)
CCH88635.1Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (750 aa)
CCH88668.1Putative Diguanylate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (781 aa)
CCH88922.1Methyl-accepting chemotaxis sensory transducer; Function of strongly homologous gene; receptor. (705 aa)
CCH89092.1Diguanylate cyclase; Function of strongly homologous gene; enzyme. (505 aa)
CCH89099.1Two-component PAS/PAC sensor protein; Function of strongly homologous gene; regulator. (708 aa)
CCH89100.1Serine phosphatase RsbU, regulator of sigma subunit; Function of strongly homologous gene; enzyme. (371 aa)
CCH89171.1Protein of unknown function; No homology to any previously reported sequences. (99 aa)
CCH89172.1Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (589 aa)
CCH89177.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function of strongly homologous gene; receptor. (636 aa)
CCH89182.1Methyl-accepting chemotaxis sensory transducer; Function of strongly homologous gene; receptor. (528 aa)
CCH89184.1Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); Function of strongly homologous gene; enzyme. (618 aa)
CCH89209.1Putative PAS/PAC sensor protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (732 aa)
CCH89210.1Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (94 aa)
CCH89234.1Methyl-accepting chemotaxis transducer/sensory box protein; Function of strongly homologous gene; cell process. (933 aa)
CCH89235.1Chemotaxis CheW protein; Function of strongly homologous gene; cell process. (505 aa)
CCH89237.1Methyl-accepting chemotaxis protein; Function of strongly homologous gene; cell process. (537 aa)
CCH89238.1Diguanylate cyclase with PAS/PAC sensor; Function of strongly homologous gene; enzyme. (288 aa)
CCH89243.1Diguanylate phosphodiesterase; Function of strongly homologous gene; enzyme. (377 aa)
CCH89255.1Diguanylate cyclase/phosphodiesterase; Function of strongly homologous gene; enzyme. (591 aa)
CCH89434.1Thioredoxin reductase (NADPH); Function of strongly homologous gene; enzyme. (554 aa)
CCH89435.1Two-component sensor histidine kinase; Function of strongly homologous gene; enzyme. (476 aa)
CCH89654.1Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (792 aa)
CCH89663.1Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (314 aa)
CCH89864.1Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); Function of strongly homologous gene; enzyme. (936 aa)
CCH89865.1Diguanylate cyclase; Function of strongly homologous gene; enzyme. (879 aa)
CCH89914.1Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (390 aa)
CCH89957.1Putative magnesium or manganese-dependent protein phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (410 aa)
CCH90238.1Putative Diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (541 aa)
CCH90323.1Diguanylate cyclase (GGDEF) domain-containing protein; Function of strongly homologous gene; enzyme. (846 aa)
CCH90356.1Diguanylate cyclase/phosphodiesterase (modular protein). (891 aa)
CCH90514.1Putative Type IV pilus assembly PilZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process. (209 aa)
CCH90658.1Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator. (904 aa)
CCH90696.1Putative methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (575 aa)
CCH90797.1Putative Diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (359 aa)
CCH90800.1Putative Anti-sigma-B factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the anti-sigma-factor antagonist family. (123 aa)
CCH90824.1Homologs of previously reported genes of unknown function. (530 aa)
CCH90882.1Homologs of previously reported genes of unknown function. (161 aa)
cheYChemotaxis protein cheY, Signal transduction response regulator, receiver region; Function of homologous gene experimentally demonstrated in an other organism; regulator. (120 aa)
CCH90884.1Conserved protein of unknown function, putative CheC domain; Homologs of previously reported genes of unknown function. (166 aa)
cheY-2Chemotaxis protein cheY; Function of strongly homologous gene; regulator. (127 aa)
cheRChemotaxis protein methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (274 aa)
cheBChemotaxis response regulator protein CheB-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (370 aa)
CCH90889.1Methyl-accepting chemotaxis protein; Function of strongly homologous gene; cell process. (537 aa)
CCH90890.1Methyl-accepting chemotaxis protein; Function of strongly homologous gene; cell process. (535 aa)
cheWChemotaxis signal transduction protein; Function of strongly homologous gene; regulator. (154 aa)
CCH90892.1Chemotaxis protein histidine kinase; Function of strongly homologous gene; enzyme. (770 aa)
CCH90899.1Putative PAS/PAC light sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (776 aa)
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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