STRINGSTRING
SIT15352.1 SIT15352.1 SIT15361.1 SIT15361.1 SIT22134.1 SIT22134.1 SIT22141.1 SIT22141.1 SIT23747.1 SIT23747.1 SIT23755.1 SIT23755.1 SIT23786.1 SIT23786.1 SIT34506.1 SIT34506.1 SIT34510.1 SIT34510.1 SIT34806.1 SIT34806.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIT15352.1Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily. (1422 aa)
SIT15361.1Acyl transferase domain-containing protein. (2335 aa)
SIT22134.1Amino acid adenylation domain-containing protein. (1341 aa)
SIT22141.1Amino acid adenylation domain-containing protein. (2155 aa)
SIT23747.1Tyrocidine synthetase-2. (1311 aa)
SIT23755.1Putative ATP-binding cassette transporter/putative ATP-binding cassette transporter. (557 aa)
SIT23786.1Surfactin synthase thioesterase subunit. (236 aa)
SIT34506.1Amino acid adenylation domain-containing protein. (3177 aa)
SIT34510.1Siderophore biosynthesis non-ribosomal peptide synthetase modules; Surfactin family lipopeptide synthetase A/fengycin family lipopeptide synthetase B/lichenysin synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family. (3252 aa)
SIT34806.1Gramicidin S synthase 2/tyrocidine synthetase-3. (1367 aa)
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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