STRINGSTRING
SIS83759.1 SIS83759.1 SIS83776.1 SIS83776.1 SIS83878.1 SIS83878.1 SIS83896.1 SIS83896.1 SIS83910.1 SIS83910.1 SIS67306.1 SIS67306.1 SIS67320.1 SIS67320.1 SIS90792.1 SIS90792.1 SIS90815.1 SIS90815.1 SIT04369.1 SIT04369.1 SIT04379.1 SIT04379.1 SIT04400.1 SIT04400.1 SIT22218.1 SIT22218.1 SIT22223.1 SIT22223.1 SIT28753.1 SIT28753.1 SIT28755.1 SIT28755.1 SIT34248.1 SIT34248.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIS83759.1TonB-linked outer membrane protein, SusC/RagA family. (1190 aa)
SIS83776.1SusD family protein. (469 aa)
SIS83878.1TonB-linked outer membrane protein, SusC/RagA family. (1186 aa)
SIS83896.1SusD family protein. (457 aa)
SIS83910.1Thiol-disulfide isomerase or thioredoxin. (488 aa)
SIS67306.1TonB-linked outer membrane protein, SusC/RagA family. (1143 aa)
SIS67320.1SusD family protein. (451 aa)
SIS90792.1Outer membrane receptor proteins, mostly Fe transport. (1380 aa)
SIS90815.1SusD family protein. (459 aa)
SIT04369.1SusD family protein. (454 aa)
SIT04379.1TonB-linked outer membrane protein, SusC/RagA family. (1162 aa)
SIT04400.1RNA polymerase sigma factor, sigma-70 family. (185 aa)
SIT22218.1SusD family protein. (456 aa)
SIT22223.1TonB-linked outer membrane protein, SusC/RagA family. (1155 aa)
SIT28753.1TonB-linked outer membrane protein, SusC/RagA family. (1061 aa)
SIT28755.1SusD family protein. (528 aa)
SIT34248.1Helix-turn-helix domain-containing protein. (144 aa)
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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