STRINGSTRING
SIT15299.1 SIT15299.1 SIT15311.1 SIT15311.1 SIT15321.1 SIT15321.1 SIT15330.1 SIT15330.1 SIT15858.1 SIT15858.1 SIT15880.1 SIT15880.1 SIT27658.1 SIT27658.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIT15299.1Uncharacterized protein, contains a NRPS condensation (elongation) domain. (588 aa)
SIT15311.1Glycosyltransferase, MGT family. (400 aa)
SIT15321.1Glycosyltransferase, MGT family. (398 aa)
SIT15330.1Pimeloyl-ACP methyl ester carboxylesterase. (253 aa)
SIT15858.12-polyprenyl-6-methoxyphenol hydroxylase. (518 aa)
SIT15880.1AraC-type DNA-binding protein. (271 aa)
SIT27658.1Condensation domain-containing protein. (433 aa)
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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