STRINGSTRING
CCR75_008031 CCR75_008031 CCR75_003605 CCR75_003605 CCR75_005968 CCR75_005968 CCR75_004520 CCR75_004520 CCR75_004392 CCR75_004392 CCR75_006698 CCR75_006698 CCR75_000635 CCR75_000635 FEN1 FEN1 CCR75_005003 CCR75_005003
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CCR75_008031Uncharacterized protein. (667 aa)
CCR75_003605Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3952 aa)
CCR75_005968VWFA domain-containing protein. (777 aa)
CCR75_004520Uncharacterized protein. (939 aa)
CCR75_004392AAA_23 domain-containing protein. (1341 aa)
CCR75_006698Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family. (868 aa)
CCR75_000635DNA ligase. (981 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (388 aa)
CCR75_005003DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (591 aa)
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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