STRINGSTRING
Daud_0386 Daud_0386 Daud_0387 Daud_0387 Daud_0388 Daud_0388 Daud_0389 Daud_0389 Daud_0391 Daud_0391
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_0386PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi02528 putative oligopeptide ABC transporter (permease); RBL00341. (312 aa)
Daud_0387PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mac:MA0880 dipeptide ABC transporter, dipeptide-binding protein. (309 aa)
Daud_0388Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (324 aa)
Daud_0389Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bja:blr1357 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (321 aa)
Daud_0391PFAM: extracellular solute-binding protein, family 5; KEGG: mac:MA3048 oligopeptide ABC transporter, solute-binding protein. (522 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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