STRINGSTRING
Daud_1390 Daud_1390 Daud_0670 Daud_0670 Daud_0672 Daud_0672 Daud_1127 Daud_1127 Daud_1129 Daud_1129 Daud_1388 Daud_1388
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_1390PFAM: inner-membrane translocator; KEGG: sth:STH1616 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
Daud_0670PFAM: inner-membrane translocator; KEGG: gka:GK3024 branched amino acid ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. (335 aa)
Daud_0672PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK3022 branched chain amino acid ABC transporter (ATP-binding protein). (239 aa)
Daud_1127PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_2228 high affinity branched-chain amino acid ABC transporter, ATP-binding protein. (235 aa)
Daud_1129PFAM: inner-membrane translocator; KEGG: swo:Swol_2111 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (299 aa)
Daud_1388PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2498 ABC transporter related. (236 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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