STRINGSTRING
Daud_0564 Daud_0564 Daud_1982 Daud_1982 Daud_1896 Daud_1896 Daud_1881 Daud_1881 Daud_1581 Daud_1581 Daud_1580 Daud_1580 Daud_1565 Daud_1565 Daud_1542 Daud_1542 Daud_1446 Daud_1446 Daud_1392 Daud_1392 Daud_1273 Daud_1273 Daud_1251 Daud_1251 Daud_1131 Daud_1131 Daud_0869 Daud_0869 Daud_0754 Daud_0754 Daud_0731 Daud_0731 Daud_0436 Daud_0436 Daud_0668 Daud_0668 Daud_0410 Daud_0410 Daud_0287 Daud_0287 Daud_0310 Daud_0310 Daud_0391 Daud_0391
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_0564CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: chy:CHY_0929 putative succinate dehydrogenase, subunit C. (283 aa)
Daud_1982PFAM: extracellular solute-binding protein, family 5; KEGG: dsy:DSY0502 hypothetical protein. (508 aa)
Daud_1896KEGG: sat:SYN_02216 hypothetical protein. (165 aa)
Daud_1881CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mta:Moth_0810 protein of unknown function DUF224, cysteine-rich region. (295 aa)
Daud_1581Formate dehydrogenase; PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: sth:STH2602 putative formate dehydrogenase subunit. (216 aa)
Daud_1580Formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sth:STH2601 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (808 aa)
Daud_1565Hypothetical protein. (386 aa)
Daud_1542PFAM: extracellular solute-binding protein, family 1; KEGG: csa:Csal_2084 molybdate-binding protein. (283 aa)
Daud_1446KEGG: swo:Swol_1734 hypothetical protein. (231 aa)
Daud_1392PFAM: Extracellular ligand-binding receptor; KEGG: sth:STH821 branched chain amino acid ABC transporter substrate-binding protein. (386 aa)
Daud_1273Hypothetical protein. (314 aa)
Daud_1251CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: chy:CHY_0929 putative succinate dehydrogenase, subunit C. (282 aa)
Daud_1131PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU3401 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative. (389 aa)
Daud_0869Hypothetical protein; KEGG: bfs:BF1207 possible phosphodiesterase/nucleotide pyrophosphatase-like protein. (377 aa)
Daud_0754Hypothetical protein. (558 aa)
Daud_0731PFAM: WD40 domain protein beta Propeller; KEGG: btk:BT9727_4089 possible TolB domain protein. (570 aa)
Daud_0436PFAM: copper amine oxidase domain protein; KEGG: mta:Moth_1790 copper amine oxidase-like. (471 aa)
Daud_0668PFAM: Extracellular ligand-binding receptor; KEGG: gka:GK3026 branched amino acid ABC transporter (substrate-binding protein). (392 aa)
Daud_0410TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bld:BLi01154 similar to molybdate-binding protein; RBL03054. (296 aa)
Daud_0287KEGG: chy:CHY_0170 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Belongs to the peptidase S41A family. (377 aa)
Daud_0310KEGG: pca:Pcar_2084 related to ABC-transporter, periplasmic substrate-binding protein. (275 aa)
Daud_0391PFAM: extracellular solute-binding protein, family 5; KEGG: mac:MA3048 oligopeptide ABC transporter, solute-binding protein. (522 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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