STRINGSTRING
Daud_0871 Daud_0871 Daud_0105 Daud_0105 Daud_0111 Daud_0111 Daud_0870 Daud_0870
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_0871KEGG: det:DET0700 carbon monoxide dehydrogenase, alpha subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit. (735 aa)
Daud_0105KEGG: mth:MTH1708 carbon monoxide dehydrogenase, alpha subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Prismane. (766 aa)
Daud_0111KEGG: mja:MJ0156 acetyl-CoA decarbonylase/synthase, subunit beta; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit. (399 aa)
Daud_0870KEGG: mma:MM0121 carbon monoxide dehydrogenase; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane. (628 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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