STRINGSTRING
Daud_1126 Daud_1126 Daud_1858 Daud_1858 Daud_1546 Daud_1546 pstB-2 pstB-2 pstB pstB Daud_1388 Daud_1388 Daud_1315 Daud_1315 Daud_1214 Daud_1214 Daud_1213 Daud_1213 Daud_1207 Daud_1207 Daud_1145 Daud_1145 Daud_1137 Daud_1137 Daud_1128 Daud_1128 Daud_1127 Daud_1127 Daud_0533 Daud_0533 Daud_0412 Daud_0412 Daud_0389 Daud_0389 Daud_0388 Daud_0388 uvrA uvrA ftsE ftsE Daud_0275 Daud_0275
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_1126KEGG: mta:Moth_2297 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (326 aa)
Daud_1858Cobalt ABC transporter, ATPase subunit; KEGG: mta:Moth_1219 cobalt transport protein ATP-binding subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; Precorrin-8X methylmutase CbiC/CobH; SMART: AAA ATPase. (541 aa)
Daud_1546PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC1702 metal ion ABC transporter ATP-binding protein. (248 aa)
pstB-2ABC transporter related; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (244 aa)
pstBPhosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (251 aa)
Daud_1388PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2498 ABC transporter related. (236 aa)
Daud_1315PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH1933 iron ABC transporter ATP-binding protein. (267 aa)
Daud_1214PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A2397 iron(III) ABC transporter, ATP-binding protein. (274 aa)
Daud_1213PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cyb:CYB_2030 ABC transporter, ATP-binding protein. (309 aa)
Daud_1207KEGG: cyb:CYB_2030 ABC transporter, ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase. (279 aa)
Daud_1145PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1715 ATPase. (236 aa)
Daud_1137PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_1128 ABC transporter related. (240 aa)
Daud_1128PFAM: ABC transporter related; KEGG: gsu:GSU3392 branched-chain amino acid ABC transporter, ATP-binding protein. (256 aa)
Daud_1127PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_2228 high affinity branched-chain amino acid ABC transporter, ATP-binding protein. (235 aa)
Daud_0533PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1092 ABC transporter, ATP-binding protein. (226 aa)
Daud_0412PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY3396 hypothetical protein. (219 aa)
Daud_0389Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bja:blr1357 peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (321 aa)
Daud_0388Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (324 aa)
uvrAExcinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (946 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)
Daud_0275Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (270 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.