STRINGSTRING
Daud_0292 Daud_0292 Daud_0668 Daud_0668 Daud_1131 Daud_1131 Daud_1392 Daud_1392
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_0292ABC-type sugar transport system periplasmic component-like protein; KEGG: gka:GK3226 ribose ABC transporter (ribose-binding protein). (425 aa)
Daud_0668PFAM: Extracellular ligand-binding receptor; KEGG: gka:GK3026 branched amino acid ABC transporter (substrate-binding protein). (392 aa)
Daud_1131PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU3401 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative. (389 aa)
Daud_1392PFAM: Extracellular ligand-binding receptor; KEGG: sth:STH821 branched chain amino acid ABC transporter substrate-binding protein. (386 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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