STRINGSTRING
Daud_0092 Daud_0092 Daud_2103 Daud_2103 Daud_2097 Daud_2097 Daud_1884 Daud_1884 Daud_1883 Daud_1883 Daud_0877 Daud_0877 Daud_0790 Daud_0790 Daud_0565 Daud_0565
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_0092PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2084 4Fe-4S ferredoxin, iron-sulfur binding protein. (1013 aa)
Daud_2103KEGG: mta:Moth_2315 hypothetical protein. (583 aa)
Daud_2097KEGG: mta:Moth_2138 hypothetical protein. (606 aa)
Daud_1884PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cch:Cag_1584 heterodisulfide reductase, subunit A. (419 aa)
Daud_1883PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase, delta subunit; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cte:CT0867 heterodisulfide reductase, subunit A/hydrogenase, delta subunit, putative. (735 aa)
Daud_0877PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gme:Gmet_2084 4Fe-4S ferredoxin, iron-sulfur binding protein. (995 aa)
Daud_0790Methyl-viologen-reducing hydrogenase, delta subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; methyl-viologen-reducing hydrogenase, delta subunit; FAD dependent oxidoreductase; KEGG: cte:CT0867 heterodisulfide reductase, subunit A/hydrogenase, delta subunit, putative. (700 aa)
Daud_0565PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing. (661 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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