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| | Daud_0012 | TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: chy:CHY_2698 D-3-phosphoglycerate dehydrogenase. (526 aa) |
| | prs | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (318 aa) |
| | fhs | PFAM: formate-tetrahydrofolate ligase, FTHFS; KEGG: rxy:Rxyl_2519 formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (566 aa) |
| | Daud_0092 | PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: gme:Gmet_2084 4Fe-4S ferredoxin, iron-sulfur binding protein. (1013 aa) |
| | folD | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (294 aa) |
| | Daud_0104 | TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: chy:CHY_0733 NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (724 aa) |
| | Daud_0105 | KEGG: mth:MTH1708 carbon monoxide dehydrogenase, alpha subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Prismane. (766 aa) |
| | Daud_0106 | TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit; PFAM: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; KEGG: mmp:MMP0984 CO dehydrogenase beta subunit/acetyl-CoA synthase subunit epsilon. (184 aa) |
| | Daud_0111 | KEGG: mja:MJ0156 acetyl-CoA decarbonylase/synthase, subunit beta; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit. (399 aa) |
| | Daud_0112 | PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; Fe-S cluster domain protein; KEGG: det:DET0699 corrinoid/iron-sulfur protein, large subunit. (452 aa) |
| | Daud_0113 | PFAM: dihydropteroate synthase, DHPS; KEGG: chy:CHY_1227 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase. (290 aa) |
| | Daud_0114 | KEGG: det:DET0701 corrinoid/iron-sulfur protein, small subunit. (298 aa) |
| | Daud_0115 | PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mta:Moth_1193 methyl-viologen-reducing hydrogenase, delta subunit. (173 aa) |
| | Daud_0117 | PFAM: methylenetetrahydrofolate reductase; KEGG: mta:Moth_1191 methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (306 aa) |
| | fhs-2 | PFAM: formate-tetrahydrofolate ligase, FTHFS; KEGG: chy:CHY_2385 formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (557 aa) |
| | Daud_0134 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mac:MA2963 iron-sulfur cluster binding protein. (161 aa) |
| | Daud_0135 | PFAM: Aldehyde ferredoxin oxidoreductase-like; KEGG: mac:MA2962 aldehyde ferredoxin oxidoreductase. (578 aa) |
| | nifH | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (280 aa) |
| | Daud_0146 | KEGG: mta:Moth_0551 nitrogenase component I, alpha chain; TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1. (482 aa) |
| | Daud_0147 | Nitrogenase; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: mmp:MMP0857 oxidoreductase, nitrogenase component 1. (490 aa) |
| | Daud_0168 | TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: cmu:TC0359 conserved hypothetical protein; Belongs to the UbiD family. (589 aa) |
| | Daud_0187 | TIGRFAM: serine O-acetyltransferase; KEGG: chy:CHY_2339 serine acetyltransferase. (238 aa) |
| | Daud_0279 | PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: gme:Gmet_1045 aldehyde ferredoxin oxidoreductase. (579 aa) |
| | Daud_0281 | KEGG: swo:Swol_1302 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (498 aa) |
| | Daud_0297 | PFAM: ROK family protein; KEGG: chy:CHY_0270 glucokinase. (321 aa) |
| | Daud_0299 | TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; PFAM: sugar isomerase (SIS); KEGG: swo:Swol_0260 bifunctional phosphoglucose/phosphomannose isomerase. (355 aa) |
| | Daud_0302 | KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (345 aa) |
| | pgk | PFAM: phosphoglycerate kinase; KEGG: chy:CHY_0281 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (393 aa) |
| | tpiA | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (257 aa) |
| | gpmI | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (509 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa) |
| | argD | TIGRFAM: acetylornithine and succinylornithine aminotransferases; PFAM: aminotransferase class-III; KEGG: mta:Moth_2287 acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (417 aa) |
| | Daud_0369 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_0098 formate dehydrogenase, beta subunit. (248 aa) |
| | ubiX | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (207 aa) |
| | Daud_0551 | TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mta:Moth_1517 glutamate synthase (NADPH), homotetrameric. (479 aa) |
| | Daud_0563 | KEGG: chy:CHY_0927 putative heterodisulfide reductase, C subunit. (211 aa) |
| | Daud_0564 | CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: chy:CHY_0929 putative succinate dehydrogenase, subunit C. (283 aa) |
| | Daud_0565 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing. (661 aa) |
| | Daud_0566 | PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: chy:CHY_0931 hydrogenase, methyl-violgen-reducing type, delta subunit, selenocysteine-containing. (144 aa) |
| | Daud_0567 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_0932 putative dehydrogenase, beta subunit. (328 aa) |
| | Daud_0650 | PFAM: class II aldolase/adducin family protein; KEGG: dsy:DSY2602 hypothetical protein. (222 aa) |
| | Daud_0653 | PFAM: aminotransferase class-III; KEGG: tte:TTE2339 PLP-dependent aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (467 aa) |
| | ppcA | Protein of unknown function DUF557; Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. Belongs to the PEPCase type 2 family. (489 aa) |
| | Daud_0788 | PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cac:CAC0104 adenylylsulfate reductase, subunit A. (579 aa) |
| | Daud_0789 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: afu:AF1669 adenylylsulfate reductase, subunit B. (107 aa) |
| | Daud_0799 | Phosphoadenosine phosphosulfate reductase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; phosphoadenosine phosphosulfate reductase; KEGG: pai:PAE1989 hypothetical protein. (755 aa) |
| | Daud_0825 | TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); phosphoserine phosphatase-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mth:MTH1626 phosphoserine phosphatase. (225 aa) |
| | Daud_0870 | KEGG: mma:MM0121 carbon monoxide dehydrogenase; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane. (628 aa) |
| | Daud_0871 | KEGG: det:DET0700 carbon monoxide dehydrogenase, alpha subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit. (735 aa) |
| | Daud_0872 | PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; Fe-S cluster domain protein; KEGG: chy:CHY_1223 acetyl-CoA decarbonylase/synthase complex subunit gamma. (443 aa) |
| | Daud_0875 | PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; KEGG: chy:CHY_1226 acetyl-CoA decarbonylase/synthase complex subunit delta. (326 aa) |
| | Daud_0876 | PFAM: dihydropteroate synthase, DHPS; KEGG: chy:CHY_1227 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase. (281 aa) |
| | Daud_0877 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gme:Gmet_2084 4Fe-4S ferredoxin, iron-sulfur binding protein. (995 aa) |
| | Daud_0878 | PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mta:Moth_1193 methyl-viologen-reducing hydrogenase, delta subunit. (145 aa) |
| | Daud_0880 | PFAM: methylenetetrahydrofolate reductase; KEGG: mta:Moth_1191 methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (314 aa) |
| | Daud_0881 | KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (358 aa) |
| | Daud_0895 | TIGRFAM: ATP-grasp domain protein; PFAM: CoA-binding domain protein; KEGG: mst:Msp_0919 predicted acyl-CoA synthetase. (700 aa) |
| | Daud_0928 | PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: mta:Moth_1052 phosphoesterase, RecJ-like. (331 aa) |
| | dapB | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (254 aa) |
| | asd | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (336 aa) |
| | dapA | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (294 aa) |
| | Daud_1016 | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (446 aa) |
| | folD-2 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (287 aa) |
| | Daud_1038 | PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: chy:CHY_1107 putative isocitrate dehydrogenase, NAD-dependent. (336 aa) |
| | Daud_1041 | KEGG: chy:CHY_1546 [Ni/Fe] hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein. (318 aa) |
| | Daud_1042 | PFAM: nickel-dependent hydrogenase, large subunit; KEGG: chy:CHY_1545 [Ni/Fe] hydrogenase, large subunit. (485 aa) |
| | Daud_1043 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH2600 formate dehydrogenase beta subunit. (280 aa) |
| | accD | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (275 aa) |
| | accA | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (315 aa) |
| | pfkA | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (320 aa) |
| | Daud_1056 | PFAM: pyruvate kinase; HpcH/HpaI aldolase; PEP-utilising enzyme, mobile region; KEGG: mta:Moth_1867 pyruvate kinase; Belongs to the pyruvate kinase family. (585 aa) |
| | Daud_1058 | Proposed homoserine kinase; KEGG: pca:Pcar_1514 cofactor-independent phosphoglycerate mutase; TIGRFAM: phosphonopyruvate decarboxylase-related protein; proposed homoserine kinase; PFAM: metalloenzyme domain protein. (405 aa) |
| | Daud_1073 | PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; KEGG: mta:Moth_1307 homoserine dehydrogenase. (431 aa) |
| | thrB | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (313 aa) |
| | Daud_1075 | KEGG: mta:Moth_1304 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family. (410 aa) |
| | sat | KEGG: cte:CT0862 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family. (420 aa) |
| | Daud_1078 | KEGG: mpa:MAP2598c sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase. (420 aa) |
| | Daud_1104 | PFAM: formylmethanofuran dehydrogenase, subunit E region; KEGG: mta:Moth_1467 formylmethanofuran dehydrogenase, subunit E region. (197 aa) |
| | pfkA-2 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (370 aa) |
| | mdh | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (309 aa) |
| | Daud_1158 | PFAM: acylphosphatase; KEGG: pai:PAE1232 acylphosphatase, putative. (94 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (440 aa) |
| | Daud_1249 | L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gme:Gmet_2911 fumarate reductase/succinate dehydrogenase flavoprotein-like. (532 aa) |
| | Daud_1251 | CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: chy:CHY_0929 putative succinate dehydrogenase, subunit C. (282 aa) |
| | Daud_1253 | TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: mta:Moth_2282 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region. (186 aa) |
| | Daud_1254 | TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: chy:CHY_1375 fumarate hydratase. (294 aa) |
| | Daud_1270 | Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tte:TTE1762 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (332 aa) |
| | Daud_1309 | PFAM: (2R)-phospho-3-sulfolactate synthase, ComA; KEGG: mta:Moth_0118 (2R)-phospho-3-sulfolactate synthase, ComA. (262 aa) |
| | hemL | TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: mta:Moth_1244 glutamate-1-semialdehyde-2,1-aminomutase. (432 aa) |
| | Daud_1344 | Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: mta:Moth_1246 porphobilinogen synthase; Belongs to the ALAD family. (322 aa) |
| | Daud_1346 | TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dsy:DSY2224 hypothetical protein. (511 aa) |
| | hemC | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (309 aa) |
| | hemA | Shikimate/quinate 5-dehydrogenase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (446 aa) |
| | Daud_1349 | TIGRFAM: siroheme synthase; KEGG: sat:SYN_02276 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. (213 aa) |
| | ldh | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (310 aa) |
| | Daud_1563 | PFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: ape:APE0033 phosphoenolpyruvate carboxykinase (ATP); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (521 aa) |
| | acsA | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (660 aa) |
| | Daud_1573 | Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (431 aa) |
| | Daud_1574 | Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (441 aa) |
| | Daud_1579 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH2600 formate dehydrogenase beta subunit. (262 aa) |
| | Daud_1580 | Formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sth:STH2601 formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (808 aa) |
| | Daud_1581 | Formate dehydrogenase; PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: sth:STH2602 putative formate dehydrogenase subunit. (216 aa) |
| | Daud_1586 | PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: gka:GK1178 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (219 aa) |
| | dapF | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (278 aa) |
| | Daud_1606 | PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dde:Dde_0046 pyruvate ferredoxin/flavodoxin oxidoreductase family protein. (192 aa) |
| | Daud_1607 | PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: swo:Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit. (221 aa) |
| | Daud_1608 | PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: chy:CHY_1972 2-oxoglutarate ferredoxin oxidoreductase. (367 aa) |
| | Daud_1609 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: swo:Swol_1401 4Fe-4S ferredoxin, iron-sulfur binding. (80 aa) |
| | Daud_1651 | PFAM: nickel-dependent hydrogenase, large subunit; KEGG: ade:Adeh_4162 nickel-dependent hydrogenase, large subunit. (485 aa) |
| | Daud_1652 | PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: ade:Adeh_4163 methyl-viologen-reducing hydrogenase, delta subunit. (317 aa) |
| | Daud_1653 | PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mth:MTH1138 methyl viologen-reducing hydrogenase, delta subunit homolog FlpD. (146 aa) |
| | Daud_1702 | PFAM: phosphoadenosine phosphosulfate reductase; KEGG: dvu:DVU1566 phosphoadenosine phosphosulfate reductase, putative. (228 aa) |
| | fbp | Protein of unknown function DUF100; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). (370 aa) |
| | Daud_1881 | CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mta:Moth_0810 protein of unknown function DUF224, cysteine-rich region. (295 aa) |
| | Daud_1885 | TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: afu:AF1670 adenylylsulfate reductase, subunit A. (629 aa) |
| | Daud_1886 | TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cte:CT0864 adenylylsulfate reductase, subunit B. (145 aa) |
| | Daud_1888 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dde:Dde_1109 adenylylsulfate reductase, beta subunit. (114 aa) |
| | Daud_1889 | PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: afu:AF1670 adenylylsulfate reductase, subunit A. (591 aa) |
| | Daud_1926 | KEGG: chy:CHY_0443 pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; Belongs to the PEP-utilizing enzyme family. (890 aa) |
| | Daud_1927 | TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: mta:Moth_2283 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region. (280 aa) |
| | Daud_1928 | TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: aae:aq_1679 fumarate hydratase beta subunit. (187 aa) |
| | Daud_1929 | KEGG: dde:Dde_1258 fumarate reductase, cytochrome b subunit. (212 aa) |
| | Daud_1930 | KEGG: dvu:DVU3262 fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (595 aa) |
| | Daud_1931 | TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: dvu:DVU3263 fumarate reductase, iron-sulfur protein. (247 aa) |
| | Daud_1939 | KEGG: dsy:DSY0796 Hup-type Ni,Fe-hydrogenase small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit. (375 aa) |
| | Daud_1940 | Hydrogen:quinone oxidoreductase; PFAM: nickel-dependent hydrogenase, large subunit; KEGG: chy:CHY_1545 [Ni/Fe] hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (475 aa) |
| | Daud_1941 | KEGG: chy:CHY_1544 [Ni/Fe] hydrogenase, b-type cytochrome subunit. (186 aa) |
| | Daud_1946 | Pyruvate, water dikinase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; KEGG: sru:SRU_1138 phosphoenolpyruvate synthase. (1115 aa) |
| | Daud_1961 | PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: aae:aq_1168 pyruvate ferredoxin oxidoreductase, beta subunit. (286 aa) |
| | Daud_1962 | PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: aae:aq_1167 pyruvate ferredoxin oxidoreductase, alpha subunit. (394 aa) |
| | Daud_1963 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: afu:AF1700 pyruvate ferredoxin oxidoreductase, delta subunit. (64 aa) |
| | Daud_1964 | TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: aae:aq_1169 pyruvate ferredoxin oxidoreductase, gamma subunit. (223 aa) |
| | Daud_1965 | PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: aae:aq_1168 pyruvate ferredoxin oxidoreductase, beta subunit. (290 aa) |
| | Daud_1966 | PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: aae:aq_1167 pyruvate ferredoxin oxidoreductase, alpha subunit. (380 aa) |
| | Daud_2023 | KEGG: chy:CHY_0704 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp. (443 aa) |
| | Daud_2027 | KEGG: mta:Moth_1297 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp. (443 aa) |
| | Daud_2030 | Glutamate--ammonia ligase; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: mta:Moth_1297 glutamine synthetase, type I. (445 aa) |
| | Daud_2043 | PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: bld:BLi04290 putative alcohol dehydrogenase/acetaldehyde dehydrogenase; RBL03615; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (858 aa) |
| | Daud_2072 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_0046 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit. (92 aa) |
| | Daud_2073 | TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: chy:CHY_0045 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit. (195 aa) |
| | Daud_2075 | PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: chy:CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit. (380 aa) |
| | Daud_2077 | PFAM: Transketolase, central region; Transketolase domain protein; KEGG: chy:CHY_0166 putative transketolase, C-terminal subunit. (308 aa) |
| | Daud_2078 | PFAM: Transketolase domain protein; KEGG: mta:Moth_0236 transketolase-like. (271 aa) |
| | glyA | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (415 aa) |
| | Daud_2148 | TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: gka:GK3371 ribose 5-phosphate isomerase. (152 aa) |
| | tal | Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (215 aa) |
| | Daud_2175 | KEGG: chy:CHY_0128 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase, class-II. (288 aa) |
| | Daud_2192 | KEGG: dsy:DSY4518 hypothetical protein. (255 aa) |
| | Daud_2200 | KEGG: mta:Moth_1600 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region. (396 aa) |
| | Daud_2201 | KEGG: mta:Moth_1601 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region. (473 aa) |
