STRINGSTRING
Daud_0273 Daud_0273 Daud_0274 Daud_0274 Daud_0275 Daud_0275 ftsE ftsE Daud_0285 Daud_0285 Daud_0310 Daud_0310 Daud_0410 Daud_0410 Daud_0411 Daud_0411 Daud_0412 Daud_0412 Daud_0668 Daud_0668 Daud_0669 Daud_0669 Daud_0671 Daud_0671 Daud_0672 Daud_0672 Daud_0833 Daud_0833 Daud_1127 Daud_1127 Daud_1128 Daud_1128 Daud_1129 Daud_1129 Daud_1130 Daud_1130 Daud_1131 Daud_1131 Daud_1135 Daud_1135 Daud_1136 Daud_1136 Daud_1137 Daud_1137 Daud_1151 Daud_1151 Daud_1388 Daud_1388 Daud_1389 Daud_1389 Daud_1390 Daud_1390 Daud_1391 Daud_1391 Daud_1392 Daud_1392 pstB pstB pstB-2 pstB-2 Daud_1541 Daud_1541 Daud_1542 Daud_1542 Daud_1547 Daud_1547 Daud_1858 Daud_1858 Daud_1859 Daud_1859 cbiN cbiN cbiM cbiM Daud_1909 Daud_1909 Daud_1956 Daud_1956 Daud_1958 Daud_1958 Daud_1959 Daud_1959 Daud_2086 Daud_2086
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daud_0273PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: tde:TDE2131 cobalamin biosynthesis protein CbiM, putative. (231 aa)
Daud_0274TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mag:amb4337 ABC-type cobalt transport system, permease component CbiQ and related transporters. (265 aa)
Daud_0275Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (270 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)
Daud_0285Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (295 aa)
Daud_0310KEGG: pca:Pcar_2084 related to ABC-transporter, periplasmic substrate-binding protein. (275 aa)
Daud_0410TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bld:BLi01154 similar to molybdate-binding protein; RBL03054. (296 aa)
Daud_0411Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (227 aa)
Daud_0412PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY3396 hypothetical protein. (219 aa)
Daud_0668PFAM: Extracellular ligand-binding receptor; KEGG: gka:GK3026 branched amino acid ABC transporter (substrate-binding protein). (392 aa)
Daud_0669PFAM: inner-membrane translocator; KEGG: gka:GK3025 branched amino acid ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. (294 aa)
Daud_0671PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0969 branched-chain amino acid transport ATP-binding protein livG. (252 aa)
Daud_0672PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK3022 branched chain amino acid ABC transporter (ATP-binding protein). (239 aa)
Daud_0833PFAM: periplasmic solute binding protein; KEGG: mta:Moth_0930 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. (345 aa)
Daud_1127PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_2228 high affinity branched-chain amino acid ABC transporter, ATP-binding protein. (235 aa)
Daud_1128PFAM: ABC transporter related; KEGG: gsu:GSU3392 branched-chain amino acid ABC transporter, ATP-binding protein. (256 aa)
Daud_1129PFAM: inner-membrane translocator; KEGG: swo:Swol_2111 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (299 aa)
Daud_1130PFAM: inner-membrane translocator; KEGG: swo:Swol_2112 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (293 aa)
Daud_1131PFAM: Extracellular ligand-binding receptor; KEGG: gsu:GSU3401 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative. (389 aa)
Daud_1135PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: mta:Moth_1126 extracellular solute-binding protein, family 3. (268 aa)
Daud_1136TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1127 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine. (235 aa)
Daud_1137PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_1128 ABC transporter related. (240 aa)
Daud_1151PFAM: periplasmic solute binding protein; KEGG: dvu:DVU0102 cation ABC transporter, periplasmic binding protein. (291 aa)
Daud_1388PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2498 ABC transporter related. (236 aa)
Daud_1389PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH824 branched chain amino acid ABC transporter ATP-binding protein. (256 aa)
Daud_1390PFAM: inner-membrane translocator; KEGG: sth:STH1616 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
Daud_1391PFAM: inner-membrane translocator; KEGG: sth:STH1615 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (294 aa)
Daud_1392PFAM: Extracellular ligand-binding receptor; KEGG: sth:STH821 branched chain amino acid ABC transporter substrate-binding protein. (386 aa)
pstBPhosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (251 aa)
pstB-2ABC transporter related; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (244 aa)
Daud_1541PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: swo:Swol_1632 sulfate/tungstate uptake family ABC transporter, permease protein. (217 aa)
Daud_1542PFAM: extracellular solute-binding protein, family 1; KEGG: csa:Csal_2084 molybdate-binding protein. (283 aa)
Daud_1547PFAM: ABC-3 protein; KEGG: mta:Moth_0928 ABC-3. (279 aa)
Daud_1858Cobalt ABC transporter, ATPase subunit; KEGG: mta:Moth_1219 cobalt transport protein ATP-binding subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; Precorrin-8X methylmutase CbiC/CobH; SMART: AAA ATPase. (541 aa)
Daud_1859TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mta:Moth_1220 cobalt ABC transporter CbiQ, permease subunit. (257 aa)
cbiNCobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (96 aa)
cbiMCobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (224 aa)
Daud_1909PFAM: inner-membrane translocator; KEGG: mta:Moth_1950 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (305 aa)
Daud_1956TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mth:MTH1727 phosphate transport system substrate-binding protein. (283 aa)
Daud_1958TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mth:MTH1730 phosphate transport system permease protein. (287 aa)
Daud_1959TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mth:MTH1729 phosphate transport system permease protein. (290 aa)
Daud_2086PFAM: BioY protein; KEGG: det:DET1184 BioY family protein. (197 aa)
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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