23 items (Plasmopara halstedii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0N7L5L8	Nuclear pore protein. (907 aa)
	A0A0N7L6L7	Protein iws1 homolog. (423 aa)
	A0A0N7L7A4	Nuclear pore complex, Nup88/rNup84 component. (880 aa)
	A0A0P1A4E4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1101 aa)
	A0A0P1A7R2	Nuclear matrix protein. (600 aa)
	A0A0P1A8Z1	Tho complex subunit 4-like. (301 aa)
	A0A0P1ACH7	WD40/YVTN repeat-like-containing domain. (1299 aa)
	A0A0P1AD86	Nuclear cap-binding protein. (897 aa)
	A0A0P1AIC9	WD40 repeat protein. (323 aa)
	A0A0P1ALI7	Wd-40 repeat protein. (249 aa)
	A0A0P1AMV1	Uncharacterized conserved protein. (99 aa)
	A0A0P1ANK4	Nuclear pore complex, Nup160 component. (1558 aa)
	A0A0P1ARZ6	Atp-dependent rna helicase dbp5. (458 aa)
	A0A0P1ASX9	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal. (693 aa)
	A0A0P1AUN8	Nuclear protein export factor. (1921 aa)
	A0A0P1AVU6	Pci domain-containing protein 2. (400 aa)
	A0A0P1AVV7	Tho complex subunit 7 homolog. (222 aa)
	A0A0P1AZ27	Nucleoporin gle1. (616 aa)
	A0A0P1B094	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (108 aa)
	A0A0P1B0S0	Nuclear protein export factor. (361 aa)
	A0A0P1B258	Dna-directed rna polymerase ii subunit rpb4-like. (155 aa)
	A0A0P1B6V3	mRNA export protein (Contains WD40 repeats). (343 aa)
	A0A0P1B7G5	Conserved coiled/coiled coil protein. (704 aa)

Your Current Organism:

Plasmopara halstedii

NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N7L5L8	A0A0N7L7A4	Nuclear pore protein.	Nuclear pore complex, Nup88/rNup84 component.	0.961
A0A0N7L5L8	A0A0P1A4E4	Nuclear pore protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.996
A0A0N7L5L8	A0A0P1A8Z1	Nuclear pore protein.	Tho complex subunit 4-like.	0.816
A0A0N7L5L8	A0A0P1ACH7	Nuclear pore protein.	WD40/YVTN repeat-like-containing domain.	0.986
A0A0N7L5L8	A0A0P1AD86	Nuclear pore protein.	Nuclear cap-binding protein.	0.682
A0A0N7L5L8	A0A0P1ANK4	Nuclear pore protein.	Nuclear pore complex, Nup160 component.	0.960
A0A0N7L5L8	A0A0P1AZ27	Nuclear pore protein.	Nucleoporin gle1.	0.897
A0A0N7L5L8	A0A0P1B6V3	Nuclear pore protein.	mRNA export protein (Contains WD40 repeats).	0.942
A0A0N7L6L7	A0A0P1AD86	Protein iws1 homolog.	Nuclear cap-binding protein.	0.505
A0A0N7L6L7	A0A0P1B258	Protein iws1 homolog.	Dna-directed rna polymerase ii subunit rpb4-like.	0.606
A0A0N7L7A4	A0A0N7L5L8	Nuclear pore complex, Nup88/rNup84 component.	Nuclear pore protein.	0.961
A0A0N7L7A4	A0A0P1A4E4	Nuclear pore complex, Nup88/rNup84 component.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.980
A0A0N7L7A4	A0A0P1ACH7	Nuclear pore complex, Nup88/rNup84 component.	WD40/YVTN repeat-like-containing domain.	0.965
A0A0N7L7A4	A0A0P1AD86	Nuclear pore complex, Nup88/rNup84 component.	Nuclear cap-binding protein.	0.690
A0A0N7L7A4	A0A0P1ANK4	Nuclear pore complex, Nup88/rNup84 component.	Nuclear pore complex, Nup160 component.	0.956
A0A0N7L7A4	A0A0P1ARZ6	Nuclear pore complex, Nup88/rNup84 component.	Atp-dependent rna helicase dbp5.	0.595
A0A0N7L7A4	A0A0P1AZ27	Nuclear pore complex, Nup88/rNup84 component.	Nucleoporin gle1.	0.804
A0A0N7L7A4	A0A0P1B6V3	Nuclear pore complex, Nup88/rNup84 component.	mRNA export protein (Contains WD40 repeats).	0.837
A0A0P1A4E4	A0A0N7L5L8	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore protein.	0.996
A0A0P1A4E4	A0A0N7L7A4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex, Nup88/rNup84 component.	0.980