(16 nodes) snRNA metabolic process network (Plasmopara halstedii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0P1A8X6	Exosome complex exonuclease rrp6-like protein. (816 aa)
	A0A0P1AC34	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46. (185 aa)
	A0A0P1ADG9	Integrator complex. (1334 aa)
	A0A0P1AE71	Exosome complex exonuclease mtr3-like protein. (247 aa)
	A0A0P1AFW7	U6 snrna phosphodiesterase-like. (207 aa)
	A0A0P1AHR7	Exosome complex component rrp41. (278 aa)
	A0A0P1AL56	Exosome complex exonuclease rrp42-like protein. (295 aa)
	A0A0P1AQD6	Small nuclear RNA activating protein complex-50kD subunit (SNAP50). (448 aa)
	A0A0P1ARW6	Armadillo-type fold. (985 aa)
	A0A0P1AS95	Uncharacterized conserved protein. (1127 aa)
	A0A0P1ATC1	Exosome complex exonuclease rrp4. (286 aa)
	A0A0P1AV00	Uncharacterized conserved protein. (2468 aa)
	A0A0P1AVT1	Uncharacterized conserved protein. (6239 aa)
	A0A0P1AW80	Polymyositis scleroderma autoantigen 1. (508 aa)
	A0A0P1B2B6	H aca ribonucleoprotein complex subunit 3. (65 aa)
	A0A0P1B3X8	Integrator complex. (668 aa)

Your Current Organism:

Plasmopara halstedii

NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0P1A8X6	A0A0P1AC34	Exosome complex exonuclease rrp6-like protein.	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	0.996
A0A0P1A8X6	A0A0P1AE71	Exosome complex exonuclease rrp6-like protein.	Exosome complex exonuclease mtr3-like protein.	0.973
A0A0P1A8X6	A0A0P1AHR7	Exosome complex exonuclease rrp6-like protein.	Exosome complex component rrp41.	0.973
A0A0P1A8X6	A0A0P1AL56	Exosome complex exonuclease rrp6-like protein.	Exosome complex exonuclease rrp42-like protein.	0.995
A0A0P1A8X6	A0A0P1ATC1	Exosome complex exonuclease rrp6-like protein.	Exosome complex exonuclease rrp4.	0.996
A0A0P1A8X6	A0A0P1AW80	Exosome complex exonuclease rrp6-like protein.	Polymyositis scleroderma autoantigen 1.	0.996
A0A0P1AC34	A0A0P1A8X6	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	Exosome complex exonuclease rrp6-like protein.	0.996
A0A0P1AC34	A0A0P1AE71	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	Exosome complex exonuclease mtr3-like protein.	0.980
A0A0P1AC34	A0A0P1AHR7	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	Exosome complex component rrp41.	0.980
A0A0P1AC34	A0A0P1AL56	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	Exosome complex exonuclease rrp42-like protein.	0.999
A0A0P1AC34	A0A0P1ATC1	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	Exosome complex exonuclease rrp4.	0.999
A0A0P1AC34	A0A0P1AW80	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	Polymyositis scleroderma autoantigen 1.	0.998
A0A0P1ADG9	A0A0P1ARW6	Integrator complex.	Armadillo-type fold.	0.982
A0A0P1ADG9	A0A0P1AS95	Integrator complex.	Uncharacterized conserved protein.	0.994
A0A0P1ADG9	A0A0P1AV00	Integrator complex.	Uncharacterized conserved protein.	0.998
A0A0P1ADG9	A0A0P1AVT1	Integrator complex.	Uncharacterized conserved protein.	0.974
A0A0P1ADG9	A0A0P1B3X8	Integrator complex.	Integrator complex.	0.998
A0A0P1AE71	A0A0P1A8X6	Exosome complex exonuclease mtr3-like protein.	Exosome complex exonuclease rrp6-like protein.	0.973
A0A0P1AE71	A0A0P1AC34	Exosome complex exonuclease mtr3-like protein.	Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.	0.980
A0A0P1AE71	A0A0P1AL56	Exosome complex exonuclease mtr3-like protein.	Exosome complex exonuclease rrp42-like protein.	0.989