49 items (Plasmopara halstedii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	A0A0N7L4G5	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (231 aa)
	A0A0N7L6V6	Nucleolar complex protein 4 homolog. (587 aa)
	A0A0N7L7J7	Myb-like domain. (645 aa)
	A0A0N7L7S3	Rna-binding protein nob1; Belongs to the NOB1 family. (493 aa)
	A0A0P1A7J6	Protein MAK16 homolog; Belongs to the MAK16 family. (307 aa)
	A0A0P1A9F4	Uncharacterized conserved protein. (854 aa)
	A0A0P1A9L8	Disrupter of silencing SAS10. (511 aa)
	A0A0P1AAJ0	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (844 aa)
	A0A0P1AAK2	Transducin-like 3. (915 aa)
	A0A0P1AAT5	Uncharacterized conserved protein. (537 aa)
	A0A0P1AAZ0	Ribosome biogenesis protein-Nop58p/Nop5p. (485 aa)
	A0A0P1AC07	Ribosome biogenesis protein. (219 aa)
	A0A0P1AC77	Protein involved in rRNA processing. (306 aa)
	A0A0P1ADJ3	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (171 aa)
	A0A0P1ADM9	Ribosome production factor 1. (326 aa)
	A0A0P1AEW0	Nucleolar protein-like/EBNA1-binding protein. (332 aa)
	A0A0P1AGK5	Rrna 2-o-methyltransferase fibrillarin. (248 aa)
	A0A0P1AGR8	Rrna biogenesis protein rrp5. (1938 aa)
	A0A0P1AJR1	Glycoside hydrolase. (446 aa)
	A0A0P1AK11	WD40-repeat-containing subunit of the 18S rRNA processing complex. (966 aa)
	A0A0P1AK42	U3 small nucleolar rna-associated protein 18. (459 aa)
	A0A0P1AKY9	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (318 aa)
	A0A0P1AMH6	U3 small nucleolar ribonucleoprotein protein imp4. (287 aa)
	A0A0P1AN32	Low quality protein: ribosomal l1 domain-containing protein 1-like. (347 aa)
	A0A0P1AQ31	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (598 aa)
	A0A0P1AR09	U3 small nucleolar rna-associated protein 6. (669 aa)
	A0A0P1AR54	U3 snoRNP-associated protein (Contains WD40 repeats). (474 aa)
	A0A0P1ARE1	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (451 aa)
	A0A0P1ASV1	WD40-repeat-containing subunit of the 18S rRNA processing complex. (535 aa)
	A0A0P1ASZ7	Small nucleolar ribonucleoprotein u3 component. (184 aa)
	A0A0P1AUQ7	Nucleolar protein. (1123 aa)
	A0A0P1AWQ5	Uncharacterized protein. (722 aa)
	A0A0P1AX69	Bystin. (384 aa)
	A0A0P1AYD9	Ribosomal rna processing protein 1. (218 aa)
	A0A0P1AZF3	Nucleolar protein. (867 aa)
	A0A0P1AZK4	WD40 repeat protein. (706 aa)
	A0A0P1B0C0	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (662 aa)
	A0A0P1B0F5	Uncharacterized conserved protein. (272 aa)
	A0A0P1B0R4	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (250 aa)
	A0A0P1B2B1	Ribosome biogenesis protein nsa2. (260 aa)
	A0A0P1B2Z8	Atypical rio rio2 protein kinase. (430 aa)
	A0A0P1B332	Pre-rrna-processing protein tsr1. (828 aa)
	A0A0P1B3H7	Nucleolar protein NOP52/RRP1. (522 aa)
	A0A0P1B3Z2	rRNA processing protein RRP7. (255 aa)
	A0A0P1B445	Utp21 domain-containing protein. (142 aa)
	A0A0P1B478	Uncharacterized proteins of PilT N-term./Vapc superfamily. (231 aa)
	A0A0P1B5N7	Arf-gap with ank repeat and ph domain-containing protein 9. (1190 aa)
	A0A0P1B6X2	Nucleolar protein nop56. (515 aa)
	A0A0P1B7K1	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)

Your Current Organism:

Plasmopara halstedii

NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N7L4G5	A0A0N7L6V6	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Nucleolar complex protein 4 homolog.	0.771
A0A0N7L4G5	A0A0N7L7J7	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Myb-like domain.	0.673
A0A0N7L4G5	A0A0N7L7S3	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Rna-binding protein nob1; Belongs to the NOB1 family.	0.760
A0A0N7L4G5	A0A0P1A7J6	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.976
A0A0N7L4G5	A0A0P1A9F4	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized conserved protein.	0.673
A0A0N7L4G5	A0A0P1A9L8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Disrupter of silencing SAS10.	0.714
A0A0N7L4G5	A0A0P1AAJ0	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.992
A0A0N7L4G5	A0A0P1AAK2	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Transducin-like 3.	0.769
A0A0N7L4G5	A0A0P1AAT5	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Uncharacterized conserved protein.	0.833
A0A0N7L4G5	A0A0P1AAZ0	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Ribosome biogenesis protein-Nop58p/Nop5p.	0.916
A0A0N7L4G5	A0A0P1AC07	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Ribosome biogenesis protein.	0.743
A0A0N7L4G5	A0A0P1AC77	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Protein involved in rRNA processing.	0.745
A0A0N7L4G5	A0A0P1ADJ3	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.973
A0A0N7L4G5	A0A0P1ADM9	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Ribosome production factor 1.	0.980
A0A0N7L4G5	A0A0P1AEW0	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Nucleolar protein-like/EBNA1-binding protein.	0.989
A0A0N7L4G5	A0A0P1AGK5	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Rrna 2-o-methyltransferase fibrillarin.	0.859
A0A0N7L4G5	A0A0P1AGR8	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Rrna biogenesis protein rrp5.	0.980
A0A0N7L4G5	A0A0P1AJR1	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	Glycoside hydrolase.	0.752
A0A0N7L4G5	A0A0P1AK11	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.744
A0A0N7L4G5	A0A0P1AK42	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	U3 small nucleolar rna-associated protein 18.	0.752