20 items (Plasmopara halstedii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0P1B161	Cmgc cdk crk7 protein kinase; Belongs to the protein kinase superfamily. (419 aa)
	A0A0P1B7G5	Conserved coiled/coiled coil protein. (704 aa)
	A0A0P1B5V8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (479 aa)
	A0A0P1B4J1	Transcription elongation factor spt5. (770 aa)
	A0A0P1B296	Camk protein kinase. (475 aa)
	A0A0P1AT40	Uncharacterized protein. (470 aa)
	A0A0P1ARU8	Cyclin-like protein; Belongs to the cyclin family. (462 aa)
	A0A0P1AMC5	Uncharacterized protein. (482 aa)
	A0A0P1AKJ0	Uncharacterized protein. (496 aa)
	A0A0P1AJY4	Transcription elongation factor spt4. (126 aa)
	A0A0P1AMS2	Cyclin, N-terminal. (799 aa)
	A0A0P1AJF8	Uncharacterized protein. (409 aa)
	A0A0P1AAI0	RNA polymerase II assessory factor Cdc73p. (407 aa)
	A0A0P1AA68	Cmgc cdk crk7 protein variant. (618 aa)
	A0A0P1A8B6	Tpa: cyclin-t1 family protein isoform 1. (389 aa)
	A0A0P1A7R2	Nuclear matrix protein. (600 aa)
	A0A0P1A6E4	Uncharacterized protein. (478 aa)
	A0A0P1A442	Transcription elongation factor spt6. (1538 aa)
	A0A0N7L4C5	Fact complex subunit. (2281 aa)
	A0A0P1B0L2	Transcription elongation factor. (325 aa)

Your Current Organism:

Plasmopara halstedii

NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N7L4C5	A0A0P1A442	Fact complex subunit.	Transcription elongation factor spt6.	0.986
A0A0N7L4C5	A0A0P1A6E4	Fact complex subunit.	Uncharacterized protein.	0.852
A0A0N7L4C5	A0A0P1A8B6	Fact complex subunit.	Tpa: cyclin-t1 family protein isoform 1.	0.641
A0A0N7L4C5	A0A0P1AA68	Fact complex subunit.	Cmgc cdk crk7 protein variant.	0.719
A0A0N7L4C5	A0A0P1AAI0	Fact complex subunit.	RNA polymerase II assessory factor Cdc73p.	0.997
A0A0N7L4C5	A0A0P1AJF8	Fact complex subunit.	Uncharacterized protein.	0.852
A0A0N7L4C5	A0A0P1AJY4	Fact complex subunit.	Transcription elongation factor spt4.	0.982
A0A0N7L4C5	A0A0P1AKJ0	Fact complex subunit.	Uncharacterized protein.	0.852
A0A0N7L4C5	A0A0P1AMC5	Fact complex subunit.	Uncharacterized protein.	0.852
A0A0N7L4C5	A0A0P1AMS2	Fact complex subunit.	Cyclin, N-terminal.	0.641
A0A0N7L4C5	A0A0P1ARU8	Fact complex subunit.	Cyclin-like protein; Belongs to the cyclin family.	0.641
A0A0N7L4C5	A0A0P1AT40	Fact complex subunit.	Uncharacterized protein.	0.852
A0A0N7L4C5	A0A0P1B0L2	Fact complex subunit.	Transcription elongation factor.	0.852
A0A0N7L4C5	A0A0P1B161	Fact complex subunit.	Cmgc cdk crk7 protein kinase; Belongs to the protein kinase superfamily.	0.719
A0A0N7L4C5	A0A0P1B296	Fact complex subunit.	Camk protein kinase.	0.989
A0A0N7L4C5	A0A0P1B4J1	Fact complex subunit.	Transcription elongation factor spt5.	0.852
A0A0N7L4C5	A0A0P1B5V8	Fact complex subunit.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.722
A0A0P1A442	A0A0N7L4C5	Transcription elongation factor spt6.	Fact complex subunit.	0.986
A0A0P1A442	A0A0P1A6E4	Transcription elongation factor spt6.	Uncharacterized protein.	0.733
A0A0P1A442	A0A0P1AA68	Transcription elongation factor spt6.	Cmgc cdk crk7 protein variant.	0.469