50 items (Plasmopara halstedii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0P1ADI2	Rna polymerase ii 15kd isoform a. (129 aa)
	A0A0N7L384	DUF4211 domain-containing protein. (694 aa)
	A0A0N7L479	Nuclear cap-binding protein subunit 2. (238 aa)
	A0A0N7L8F9	Transcription initiation factor tfiid subunit 11. (174 aa)
	A0A0P1A4Q2	Uncharacterized conserved protein. (563 aa)
	A0A0P1A4X6	Tata box-binding protein 2. (172 aa)
	A0A0P1A8B6	Tpa: cyclin-t1 family protein isoform 1. (389 aa)
	A0A0P1A8M5	Regulator of nuclear mRNA. (401 aa)
	A0A0P1A9E8	C2H2-type domain-containing protein. (447 aa)
	A0A0P1A9S0	Transcription initiation factor tfiid subunit. (194 aa)
	A0A0P1AAE7	Transcription initiation factor iif subunit beta-like. (248 aa)
	A0A0P1ACR8	Dna-directed rna polymerase ii subunit j. (119 aa)
	A0A0P1AD86	Nuclear cap-binding protein. (897 aa)
	A0A0P1ADG9	Integrator complex. (1334 aa)
	A0A0P1AFU3	Tata-box-binding protein. (91 aa)
	A0A0P1AFU9	Rna polymerase ii subunit. (177 aa)
	A0A0P1AG91	Rna polymerase ii subunit a c-terminal domain. (205 aa)
	A0A0P1ALF7	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (160 aa)
	A0A0P1AM83	U4/U6 small nuclear ribonucleoprotein Prp4 (Contains WD40 repeats). (635 aa)
	A0A0P1AMS2	Cyclin, N-terminal. (799 aa)
	A0A0P1APM5	Transcription factor iie. (460 aa)
	A0A0P1APP6	Dna-directed rna polymerase and iii subunit. (206 aa)
	A0A0P1AQ29	Transcription initiation factor. (214 aa)
	A0A0P1AQD6	Small nuclear RNA activating protein complex-50kD subunit (SNAP50). (448 aa)
	A0A0P1ARP0	Transcription initiation factor tfiid. (867 aa)
	A0A0P1ARU8	Cyclin-like protein; Belongs to the cyclin family. (462 aa)
	A0A0P1ARW6	Armadillo-type fold. (985 aa)
	A0A0P1AS81	RNA polymerase II-binding domain. (425 aa)
	A0A0P1AS95	Uncharacterized conserved protein. (1127 aa)
	A0A0P1ASD6	Mediator of U snRNA nuclear export PHAX. (233 aa)
	A0A0P1AST6	Tata-binding protein. (263 aa)
	A0A0P1AV00	Uncharacterized conserved protein. (2468 aa)
	A0A0P1AVT1	Uncharacterized conserved protein. (6239 aa)
	A0A0P1AWL7	Tata-box-binding protein. (196 aa)
	A0A0P1AXW3	Dna-directed rna polymerase and iii subunit rpabc5. (72 aa)
	A0A0P1AYC2	annotation not available (1482 aa)
	A0A0P1AZ84	Serrate rna effector molecule. (863 aa)
	A0A0P1B029	Predicted nucleic acid binding protein. (144 aa)
	A0A0P1B0U7	mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11. (649 aa)
	A0A0P1B0V8	Dna-directed rna polymerase ii subunit rpb3-a-like. (302 aa)
	A0A0P1B258	Dna-directed rna polymerase ii subunit rpb4-like. (155 aa)
	A0A0P1B2R0	Uncharacterized protein. (360 aa)
	A0A0P1B3M9	Rna polymerase ii subunit a c-terminal domain. (212 aa)
	A0A0P1B3X8	Integrator complex. (668 aa)
	A0A0P1B5G3	Dna-directed rna polymerases and iii subunit rpabc2-like. (136 aa)
	A0A0P1B5V5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1201 aa)
	A0A0P1B5V8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (479 aa)
	A0A0P1B6A1	Transcription initiation factor-related family protein. (389 aa)
	A0A0P1B770	Transcription initiation factor tfiib. (99 aa)
	A0A0P1B771	Transcription initiation factor tfiid subunit. (1897 aa)

Your Current Organism:

Plasmopara halstedii

NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N7L384	A0A0N7L8F9	DUF4211 domain-containing protein.	Transcription initiation factor tfiid subunit 11.	0.896
A0A0N7L384	A0A0P1A4X6	DUF4211 domain-containing protein.	Tata box-binding protein 2.	0.845
A0A0N7L384	A0A0P1A8B6	DUF4211 domain-containing protein.	Tpa: cyclin-t1 family protein isoform 1.	0.548
A0A0N7L384	A0A0P1A9E8	DUF4211 domain-containing protein.	C2H2-type domain-containing protein.	0.807
A0A0N7L384	A0A0P1AAE7	DUF4211 domain-containing protein.	Transcription initiation factor iif subunit beta-like.	0.845
A0A0N7L384	A0A0P1ACR8	DUF4211 domain-containing protein.	Dna-directed rna polymerase ii subunit j.	0.827
A0A0N7L384	A0A0P1ADI2	DUF4211 domain-containing protein.	Rna polymerase ii 15kd isoform a.	0.840
A0A0N7L384	A0A0P1AFU3	DUF4211 domain-containing protein.	Tata-box-binding protein.	0.845
A0A0N7L384	A0A0P1AFU9	DUF4211 domain-containing protein.	Rna polymerase ii subunit.	0.842
A0A0N7L384	A0A0P1ALF7	DUF4211 domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.857
A0A0N7L384	A0A0P1AM83	DUF4211 domain-containing protein.	U4/U6 small nuclear ribonucleoprotein Prp4 (Contains WD40 repeats).	0.862
A0A0N7L384	A0A0P1AMS2	DUF4211 domain-containing protein.	Cyclin, N-terminal.	0.548
A0A0N7L384	A0A0P1APM5	DUF4211 domain-containing protein.	Transcription factor iie.	0.847
A0A0N7L384	A0A0P1APP6	DUF4211 domain-containing protein.	Dna-directed rna polymerase and iii subunit.	0.848
A0A0N7L384	A0A0P1AQ29	DUF4211 domain-containing protein.	Transcription initiation factor.	0.807
A0A0N7L384	A0A0P1ARP0	DUF4211 domain-containing protein.	Transcription initiation factor tfiid.	0.862
A0A0N7L384	A0A0P1ARU8	DUF4211 domain-containing protein.	Cyclin-like protein; Belongs to the cyclin family.	0.548
A0A0N7L384	A0A0P1AST6	DUF4211 domain-containing protein.	Tata-binding protein.	0.845
A0A0N7L384	A0A0P1AWL7	DUF4211 domain-containing protein.	Tata-box-binding protein.	0.845
A0A0N7L384	A0A0P1AXW3	DUF4211 domain-containing protein.	Dna-directed rna polymerase and iii subunit rpabc5.	0.846