STRINGSTRING
Namu_2035 Namu_2035 Namu_3182 Namu_3182 Namu_3209 Namu_3209 Namu_3210 Namu_3210 Namu_4551 Namu_4551 Namu_4553 Namu_4553
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Namu_2035PFAM: glycoside hydrolase family 3 domain protein; KEGG: ank:AnaeK_4399 glycoside hydrolase family 3 domain protein. (490 aa)
Namu_3182Hypothetical protein; KEGG: cvi:CV_2935 chitinase A. (334 aa)
Namu_3209Chitinase; KEGG: bps:BPSL1763 putative exported chitinase; PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII. (537 aa)
Namu_3210Glycosyltransferase probably involved in cell wall biogenesis-like protein; KEGG: rsq:Rsph17025_0962 cellulose synthase (UDP- forming). (886 aa)
Namu_4551KEGG: pzu:PHZ_c1695 hypothetical protein. (276 aa)
Namu_4553Hypothetical protein; KEGG: bvi:Bcep1808_4392 triacylglycerol lipase. (371 aa)
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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