STRINGSTRING
Namu_0010 Namu_0010 Namu_0029 Namu_0029 Namu_0403 Namu_0403 Namu_0995 Namu_0995 Namu_1151 Namu_1151 Namu_1155 Namu_1155 Namu_3834 Namu_3834
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Namu_0010PFAM: Bile acid:sodium symporter; KEGG: ppw:PputW619_2664 bile acid:sodium symporter. (291 aa)
Namu_0029PFAM: GPR1/FUN34/yaaH family protein; KEGG: apj:APJL_2062 inner membrane protein. (223 aa)
Namu_0403TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: vvy:VV2044 sodium/alanine symporter. (493 aa)
Namu_0995PFAM: sodium:dicarboxylate symporter; KEGG: rme:Rmet_4299 C4-dicarboxylate transporter DctA; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (465 aa)
Namu_1151PFAM: sodium:dicarboxylate symporter; KEGG: bbt:BBta_4205 C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (462 aa)
Namu_1155PFAM: Na+/solute symporter; KEGG: met:M446_3911 SSS family solute/sodium (Na+) symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (495 aa)
Namu_3834Hypothetical protein; KEGG: rpe:RPE_3970 GPR1/FUN34/YaaH family protein. (208 aa)
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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