STRINGSTRING
Sros_2341 Sros_2341 Sros_2342 Sros_2342 Sros_2343 Sros_2343 Sros_3481 Sros_3481 Sros_3482 Sros_3482 Sros_3483 Sros_3483
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_2341KEGG: tdn:Suden_2063 hypothetical protein. (277 aa)
Sros_2342KEGG: rpe:RPE_2839 ABC transporter related. (259 aa)
Sros_2343KEGG: glo:Glov_1833 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. (312 aa)
Sros_3481Hypothetical protein; KEGG: mlo:mll8313 ABC transporter, periplasmic binding protein. (262 aa)
Sros_3482KEGG: pfl:PFL_0076 zinc ABC transporter, permease protein. (271 aa)
Sros_3483KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein. (232 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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