STRINGSTRING
Sros_1269 Sros_1269 Sros_1270 Sros_1270 Sros_1271 Sros_1271 Sros_1272 Sros_1272 Sros_1273 Sros_1273 Sros_1274 Sros_1274 Sros_1283 Sros_1283 Sros_3184 Sros_3184 Sros_4714 Sros_4714 Sros_4847 Sros_4847 psuG psuG upp upp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_1269KEGG: bba:Bd0445 ABC-type transport system substrate-binding protein. (358 aa)
Sros_1270KEGG: ret:RHE_CH00188 sugar ABC transporter, ATP- binding protein. (507 aa)
Sros_1271KEGG: atc:AGR_C_205 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (383 aa)
Sros_1272Nucleoside ABC transporter membrane protein; KEGG: bsu:BSU31570 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (423 aa)
Sros_1273Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (131 aa)
Sros_1274Thymidine phosphorylase; KEGG: ank:AnaeK_0651 pyrimidine-nucleoside phosphorylase. (426 aa)
Sros_1283Conserved hypothetical protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (267 aa)
Sros_3184KEGG: bcj:BCAM2779 cytosine deaminase. (393 aa)
Sros_4714Uncharacterized protein putative amidase-like protein; KEGG: scl:sce1994 hypothetical protein. (265 aa)
Sros_4847KEGG: bmj:BMULJ_05301 N-isopropylammelide isopropylaminohydrolase. (376 aa)
psuGConserved hypothetical protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (312 aa)
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (212 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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