STRINGSTRING
Sros_0798 Sros_0798 gcvH gcvH gcvT gcvT Sros_3855 Sros_3855 Sros_3856 Sros_3856 Sros_3857 Sros_3857 Sros_3858 Sros_3858 Sros_3859 Sros_3859 Sros_3925 Sros_3925 gcvP gcvP Sros_7698 Sros_7698 Sros_7699 Sros_7699 Sros_8831 Sros_8831 Sros_9236 Sros_9236
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_0798KEGG: ret:RHE_CH00088 glycine cleavage system T protein; Belongs to the GcvT family. (822 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (129 aa)
gcvTGlycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine. (362 aa)
Sros_3855KEGG: dimethylglycine dehydrogenase precursor; Belongs to the GcvT family. (808 aa)
Sros_3856KEGG: rso:RSc1101 sarcosine oxidase subunit beta. (408 aa)
Sros_3857KEGG: xau:Xaut_0868 sarcosine oxidase delta subunit family protein. (92 aa)
Sros_3858KEGG: bmj:BMULJ_05011 sarcosine oxidase alpha subunit; Belongs to the GcvT family. (937 aa)
Sros_3859KEGG: bvi:Bcep1808_7299 sarcosine oxidase, gamma subunit. (190 aa)
Sros_3925KEGG: sil:SPO3529 serine hydroxymethyltransferase. (417 aa)
gcvPGlycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (951 aa)
Sros_7698KEGG: vei:Veis_2458 glycine dehydrogenase subunit 2. (519 aa)
Sros_7699Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (443 aa)
Sros_8831KEGG: sal:Sala_1845 FAD dependent oxidoreductase. (402 aa)
Sros_9236KEGG: cvi:CV_0803 5-aminolevulinate synthase. (400 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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