STRINGSTRING
Sros_0660 Sros_0660 Sros_0661 Sros_0661 Sros_1005 Sros_1005 Sros_1252 Sros_1252 Sros_1254 Sros_1254 mdh mdh Sros_1706 Sros_1706 Sros_3354 Sros_3354 Sros_6743 Sros_6743 Sros_8298 Sros_8298 Sros_8500 Sros_8500 fumC fumC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_0660KEGG: eba:ebA3150 2-oxoglutarate ferredoxin oxidoreductase subunit beta. (348 aa)
Sros_0661KEGG: afw:Anae109_1891 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. (617 aa)
Sros_1005KEGG: mlo:mll3842 citrate synthase 2; Belongs to the citrate synthase family. (368 aa)
Sros_1252KEGG: aca:ACP_1789 citrate synthase 2; Belongs to the citrate synthase family. (373 aa)
Sros_1254KEGG: oca:OCAR_5440 isocitrate dehydrogenase, NADP- dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (404 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (325 aa)
Sros_1706Malate dehydrogenase (oxaloacetate- decarboxylating); KEGG: sat:SYN_00517 NAD-dependent malic enzyme. (470 aa)
Sros_3354KEGG: dar:Daro_2777 2-oxoacid ferredoxin oxidoreductase. (1155 aa)
Sros_6743Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (923 aa)
Sros_8298KEGG: bha:BH3168 malic enzyme (malate dehydrogenase). (397 aa)
Sros_8500Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (550 aa)
fumCFumarate lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (463 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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