STRINGSTRING
Sros_0616 Sros_0616 Sros_1285 Sros_1285 Sros_2205 Sros_2205 Sros_2206 Sros_2206 Sros_2207 Sros_2207 Sros_2644 Sros_2644 Sros_2645 Sros_2645 Sros_5380 Sros_5380 Sros_6420 Sros_6420 Sros_6843 Sros_6843 Sros_6844 Sros_6844 Sros_6845 Sros_6845 Sros_8284 Sros_8284
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_0616KEGG: nwi:Nwi_1813 dihydrolipoamide dehydrogenase. (466 aa)
Sros_1285KEGG: msl:Msil_0522 dihydrolipoamide dehydrogenase. (464 aa)
Sros_2205KEGG: gsu:GSU3019 dehydrogenase, E1 component, alpha and beta subunits. (307 aa)
Sros_2206Pyruvate dehydrogenase (acetyl-transferring); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (327 aa)
Sros_2207Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; KEGG: nmu:Nmul_A0856 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. (417 aa)
Sros_2644KEGG: sus:Acid_0914 dihydrolipoyllysine-residue succinyltransferase. (479 aa)
Sros_2645KEGG: mxa:MXAN_4219 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase. (459 aa)
Sros_5380KEGG: aba:Acid345_0466 carbamoyl-phosphate synthase L chain, ATP-binding. (1829 aa)
Sros_6420KEGG: hch:HCH_06123 2-oxoisovalerate dehydrogenase. (736 aa)
Sros_6843KEGG: gsu:GSU3019 dehydrogenase, E1 component, alpha and beta subunits. (330 aa)
Sros_6844Pyruvate dehydrogenase (acetyl-transferring); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (328 aa)
Sros_6845KEGG: cko:CKO_03853 hypothetical protein. (396 aa)
Sros_8284KEGG: sus:Acid_5307 alpha-ketoglutarate decarboxylase. (1241 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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