STRINGSTRING
Sros_0993 Sros_0993 Sros_0994 Sros_0994 Sros_0995 Sros_0995 Sros_5454 Sros_5454 Sros_5457 Sros_5457 Sros_5458 Sros_5458 Sros_8405 Sros_8405
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_0993KEGG: gme:Gmet_2441 cobalamin (vitamin B12) biosynthesis CbiM protein. (344 aa)
Sros_0994KEGG: gsu:GSU1280 cobalt ABC transporter, permease protein. (253 aa)
Sros_0995Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (243 aa)
Sros_5454BioY protein; KEGG: sit:TM1040_3659 BioY protein. (215 aa)
Sros_5457KEGG: eta:ETA_08180 cobalt import ATP-binding protein CbiO. (224 aa)
Sros_5458KEGG: rru:Rru_A3687 cobalt transport protein. (201 aa)
Sros_8405KEGG: mxa:MXAN_2207 BioY family protein. (189 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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