STRINGSTRING
Sros_4717 Sros_4717 Sros_7502 Sros_7502 Sros_9108 Sros_9108 Sros_9109 Sros_9109 nbaC nbaC Sros_9111 Sros_9111 Sros_9112 Sros_9112 Sros_9113 Sros_9113 Sros_9114 Sros_9114 Sros_9115 Sros_9115 Sros_9116 Sros_9116
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_4717Aminocarboxymuconate-semialdehyde decarboxylase; KEGG: swi:Swit_1683 amidohydrolase 2. (358 aa)
Sros_7502KEGG: pla:Plav_1786 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)
Sros_9108ABC-type branched-chain amino acid transport systems ATPase component-like protein; KEGG: rle:pRL90261 putative ATP-binding ABC transporter. (254 aa)
Sros_9109KEGG: aba:Acid345_0682 tryptophan 2,3-dioxygenase. (323 aa)
nbaC3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. (171 aa)
Sros_9111KEGG: bpy:Bphyt_1470 endoribonuclease L-PSP. (140 aa)
Sros_9112KEGG: ara:Arad_7266 4-oxalocrotonate decarboxylase. (255 aa)
Sros_91134-hydroxy-2-ketovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (337 aa)
Sros_9114Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. (325 aa)
Sros_9115KEGG: rso:RS01662 putative hydratase protein. (265 aa)
Sros_9116KEGG: swi:Swit_3519 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (484 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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