STRINGSTRING
Sros_1398 Sros_1398 rbsA rbsA Sros_1400 Sros_1400 Sros_1401 Sros_1401 rbsK rbsK rbsD rbsD Sros_2414 Sros_2414 Sros_2415 Sros_2415 Sros_2416 Sros_2416 Sros_2417 Sros_2417 Sros_2490 Sros_2490 Sros_4035 Sros_4035 Sros_4036 Sros_4036 Sros_4037 Sros_4037 Sros_5538 Sros_5538 Sros_5559 Sros_5559 Sros_5560 Sros_5560 Sros_5561 Sros_5561 Sros_5562 Sros_5562 Sros_5563 Sros_5563 Sros_5564 Sros_5564 Sros_5565 Sros_5565 Sros_5566 Sros_5566 Sros_5567 Sros_5567 Sros_5568 Sros_5568 Sros_5569 Sros_5569 Sros_5570 Sros_5570 Sros_5571 Sros_5571 Sros_5572 Sros_5572 Sros_5573 Sros_5573 Sros_5895 Sros_5895 Sros_5896 Sros_5896 Sros_6220 Sros_6220 Sros_6221 Sros_6221 Sros_6222 Sros_6222 Sros_6223 Sros_6223 Sros_6738 Sros_6738 Sros_6739 Sros_6739 Sros_6740 Sros_6740 Sros_6741 Sros_6741 Sros_7475 Sros_7475 Sros_7476 Sros_7476 Sros_7477 Sros_7477 Sros_8128 Sros_8128 Sros_8129 Sros_8129 Sros_8130 Sros_8130 Sros_8211 Sros_8211 Sros_8212 Sros_8212 Sros_8213 Sros_8213 Sros_8257 Sros_8257 Sros_8258 Sros_8258 Sros_8259 Sros_8259 Sros_8492 Sros_8492 Sros_8493 Sros_8493 Sros_8494 Sros_8494 Sros_8495 Sros_8495 Sros_8496 Sros_8496 Sros_8731 Sros_8731
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_1398KEGG: pen:PSEEN1955 ribose operon repressor RbsR. (334 aa)
rbsAABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (508 aa)
Sros_1400KEGG: cvi:CV_3017 D-ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
Sros_1401KEGG: cvi:CV_3016 ribose ABC transporter, substrate binding protein. (315 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (318 aa)
rbsDRbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (129 aa)
Sros_2414KEGG: mlo:mll4201 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. (337 aa)
Sros_2415KEGG: pna:Pnap_4052 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (319 aa)
Sros_2416KEGG: acr:Acry_2781 ABC transporter related. (564 aa)
Sros_2417KEGG: acr:Acry_1070 ABC-type sugar transport system periplasmic component-like protein. (365 aa)
Sros_2490KEGG: sus:Acid_1484 xylose isomerase domain- containing protein. (292 aa)
Sros_4035KEGG: ara:Arad_8530 sugar ABC transporter. (327 aa)
Sros_4036KEGG: acr:Acry_2317 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (342 aa)
Sros_4037KEGG: acr:Acry_2316 ABC transporter related. (301 aa)
Sros_5538KEGG: sus:Acid_1482 hypothetical protein. (289 aa)
Sros_5559KEGG: sme:SM_b20157 ABC transporter periplasmic substrate-binding protein. (389 aa)
Sros_5560KEGG: bha:BH0419 GntR family transcriptional regulator. (247 aa)
Sros_5561KEGG: sus:Acid_1485 inositol 2-dehydrogenase. (323 aa)
Sros_5562Myo-inosose-2 dehydratase; KEGG: bam:Bamb_1309 xylose isomerase domain- containing protein. (281 aa)
Sros_5563KEGG: sus:Acid_1481 ribokinase-like domain- containing protein. (320 aa)
Sros_5564KEGG: sus:Acid_1482 hypothetical protein. (293 aa)
Sros_5565KEGG: sus:Acid_1480 myo-inositol catabolism IolB domain-containing protein. (282 aa)
Sros_5566KEGG: sus:Acid_1483 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family. (612 aa)
Sros_5567Phosphate/sulphate permease-like protein; KEGG: dvm:DvMF_3185 phosphate transporter. (326 aa)
Sros_5568Hypothetical protein; KEGG: dar:Daro_0678 phosphate transport regulator- like protein. (219 aa)
Sros_5569KEGG: smd:Smed_3963 binding-protein-dependent transport systems inner membrane component. (608 aa)
Sros_5570KEGG: smd:Smed_3962 ABC transporter related; Belongs to the ABC transporter superfamily. (365 aa)
Sros_5571Hydrolase (HAD superfamily)-like protein; KEGG: maq:Maqu_2496 phosphoglycolate phosphatase. (254 aa)
Sros_5572KEGG: smd:Smed_3959 inositol-phosphate phosphatase. (267 aa)
Sros_5573KEGG: mlo:mll1014 hypothetical protein. (259 aa)
Sros_5895KEGG: rde:RD1_3878 sugar kinase, putative. (304 aa)
Sros_5896KEGG: bsu:BSU17080 transcriptional regulator. (199 aa)
Sros_6220KEGG: aav:Aave_2249 inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
Sros_6221KEGG: rpi:Rpic_4097 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
Sros_6222KEGG: bja:blr3201 sugar ABC transporter ATP-binding protein. (503 aa)
Sros_6223KEGG: rpi:Rpic_4095 periplasmic binding protein/LacI transcriptional regulator. (325 aa)
Sros_6738KEGG: acr:Acry_0116 ROK family protein. (413 aa)
Sros_6739KEGG: avi:Avi_7376 ABC transporter membrane spanning protein (xylose); Belongs to the binding-protein-dependent transport system permease family. (415 aa)
Sros_6740KEGG: acr:Acry_1972 ABC transporter related. (254 aa)
Sros_6741KEGG: rso:RSp1633 D-xylose-binding periplasmic ABC transporter protein. (371 aa)
Sros_7475KEGG: dac:Daci_4580 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (363 aa)
Sros_7476KEGG: cvi:CV_3018 D-ribose transport system ATP- binding protein. (541 aa)
Sros_7477KEGG: ara:Arad_9553 sugar ABC transporter. (345 aa)
Sros_8128KEGG: bxe:Bxe_B1837 ABC Fe+3 transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (333 aa)
Sros_8129KEGG: pen:PSEEN4936 iron ABC transporter, permease protein. (502 aa)
Sros_8130KEGG: mxa:MXAN_0770 iron ABC transporter, periplasmic iron-binding protein. (340 aa)
Sros_8211KEGG: bph:Bphy_4300 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (337 aa)
Sros_8212KEGG: bte:BTH_II1609 sugar ABC transporter, ATP- binding protein. (497 aa)
Sros_8213KEGG: bxe:Bxe_B2964 ABC sugar transporter, periplasmic ligand binding protein. (353 aa)
Sros_8257KEGG: mlo:mll1012 periplasmic ribose-binding protein. (353 aa)
Sros_8258KEGG: bsu:BSU35950 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. (374 aa)
Sros_8259KEGG: spe:Spro_1962 ABC transporter-related protein. (509 aa)
Sros_8492KEGG: sus:Acid_1480 myo-inositol catabolism IolB domain-containing protein. (273 aa)
Sros_8493KEGG: sus:Acid_1482 hypothetical protein. (331 aa)
Sros_8494KEGG: sus:Acid_1481 ribokinase-like domain- containing protein. (321 aa)
Sros_8495Myo-inosose-2 dehydratase; KEGG: kpe:KPK_2564 AP endonuclease, family 2. (311 aa)
Sros_8496KEGG: bme:BMEII0574 myo-inositol 2-dehydrogenase. (325 aa)
Sros_8731KEGG: ret:RHE_PC00226 putative sugar ABC transporter, substrate-binding protein. (378 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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