STRINGSTRING
Sros_2490 Sros_2490 Sros_5561 Sros_5561 Sros_5562 Sros_5562 Sros_5563 Sros_5563 Sros_5564 Sros_5564 Sros_5565 Sros_5565 Sros_5566 Sros_5566 Sros_8492 Sros_8492 Sros_8493 Sros_8493 Sros_8494 Sros_8494 Sros_8495 Sros_8495 Sros_8496 Sros_8496
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_2490KEGG: sus:Acid_1484 xylose isomerase domain- containing protein. (292 aa)
Sros_5561KEGG: sus:Acid_1485 inositol 2-dehydrogenase. (323 aa)
Sros_5562Myo-inosose-2 dehydratase; KEGG: bam:Bamb_1309 xylose isomerase domain- containing protein. (281 aa)
Sros_5563KEGG: sus:Acid_1481 ribokinase-like domain- containing protein. (320 aa)
Sros_5564KEGG: sus:Acid_1482 hypothetical protein. (293 aa)
Sros_5565KEGG: sus:Acid_1480 myo-inositol catabolism IolB domain-containing protein. (282 aa)
Sros_5566KEGG: sus:Acid_1483 thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family. (612 aa)
Sros_8492KEGG: sus:Acid_1480 myo-inositol catabolism IolB domain-containing protein. (273 aa)
Sros_8493KEGG: sus:Acid_1482 hypothetical protein. (331 aa)
Sros_8494KEGG: sus:Acid_1481 ribokinase-like domain- containing protein. (321 aa)
Sros_8495Myo-inosose-2 dehydratase; KEGG: kpe:KPK_2564 AP endonuclease, family 2. (311 aa)
Sros_8496KEGG: bme:BMEII0574 myo-inositol 2-dehydrogenase. (325 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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