STRINGSTRING
Sros_9123 Sros_9123 Sros_0947 Sros_0947 Sros_7703 Sros_7703
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_9123KEGG: scl:sce1698 putative pterin-4-alpha- carbinolamine dehydratase. (112 aa)
Sros_0947KEGG: rlt:Rleg2_1526 hypothetical protein. (236 aa)
Sros_7703KEGG: aca:ACP_1052 putative pterin-4-alpha- carbinolamine dehydratase. (96 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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