Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Sros_0327 | Sros_8429 | Sros_0327 | Sros_8429 | Succinyl-diaminopimelate desuccinylase; KEGG: dde:Dde_1186 M20/M25/M40 family peptidase. | Dipeptidase; KEGG: scl:sce2952 dipeptidase. | 0.957 |
| Sros_0327 | Sros_9310 | Sros_0327 | Sros_9310 | Succinyl-diaminopimelate desuccinylase; KEGG: dde:Dde_1186 M20/M25/M40 family peptidase. | KEGG: pca:Pcar_1903 aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.441 |
| Sros_0327 | dapB | Sros_0327 | Sros_2134 | Succinyl-diaminopimelate desuccinylase; KEGG: dde:Dde_1186 M20/M25/M40 family peptidase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.571 |
| Sros_0327 | dapD | Sros_0327 | Sros_6134 | Succinyl-diaminopimelate desuccinylase; KEGG: dde:Dde_1186 M20/M25/M40 family peptidase. | Putative tetrahydrodipicolinate N- succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.582 |
| Sros_0327 | dapF | Sros_0327 | Sros_2235 | Succinyl-diaminopimelate desuccinylase; KEGG: dde:Dde_1186 M20/M25/M40 family peptidase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.954 |
| Sros_0440 | Sros_3753 | Sros_0440 | Sros_3753 | Diaminopimelate decarboxylase-like protein; KEGG: bar:GBAA1438 diaminopimelate decarboxylase. | KEGG: hch:HCH_03695 diaminopimelate decarboxylase. | 0.758 |
| Sros_0440 | Sros_9310 | Sros_0440 | Sros_9310 | Diaminopimelate decarboxylase-like protein; KEGG: bar:GBAA1438 diaminopimelate decarboxylase. | KEGG: pca:Pcar_1903 aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.810 |
| Sros_0440 | Sros_9311 | Sros_0440 | Sros_9311 | Diaminopimelate decarboxylase-like protein; KEGG: bar:GBAA1438 diaminopimelate decarboxylase. | Aspartate kinase; KEGG: dat:HRM2_35870 LysC; Belongs to the aspartokinase family. | 0.687 |
| Sros_0440 | dapB | Sros_0440 | Sros_2134 | Diaminopimelate decarboxylase-like protein; KEGG: bar:GBAA1438 diaminopimelate decarboxylase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.864 |
| Sros_0440 | dapD | Sros_0440 | Sros_6134 | Diaminopimelate decarboxylase-like protein; KEGG: bar:GBAA1438 diaminopimelate decarboxylase. | Putative tetrahydrodipicolinate N- succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.458 |
| Sros_0440 | dapF | Sros_0440 | Sros_2235 | Diaminopimelate decarboxylase-like protein; KEGG: bar:GBAA1438 diaminopimelate decarboxylase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.976 |
| Sros_1268 | Sros_8431 | Sros_1268 | Sros_8431 | Aminoacylase; KEGG: bsu:BSU29290 hypothetical protein. | KEGG: bba:Bd1775 2,3,4,5-tetrahydropyridine-2- carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | 0.506 |
| Sros_1268 | Sros_9310 | Sros_1268 | Sros_9310 | Aminoacylase; KEGG: bsu:BSU29290 hypothetical protein. | KEGG: pca:Pcar_1903 aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.408 |
| Sros_1268 | dapB | Sros_1268 | Sros_2134 | Aminoacylase; KEGG: bsu:BSU29290 hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.435 |
| Sros_1268 | dapD | Sros_1268 | Sros_6134 | Aminoacylase; KEGG: bsu:BSU29290 hypothetical protein. | Putative tetrahydrodipicolinate N- succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.427 |
| Sros_1518 | Sros_8429 | Sros_1518 | Sros_8429 | Peptidase M20; KEGG: ade:Adeh_0863 peptidase M20. | Dipeptidase; KEGG: scl:sce2952 dipeptidase. | 0.457 |
| Sros_2361 | Sros_2367 | Sros_2361 | Sros_2367 | KEGG: bja:bll4205 hypothetical protein; Belongs to the DapA family. | Dihydrodipicolinate synthase/N-acetylneuraminate lyase-like protein; KEGG: acp:A2cp1_4217 dihydrodipicolinate synthase. | 0.601 |
| Sros_2361 | Sros_9310 | Sros_2361 | Sros_9310 | KEGG: bja:bll4205 hypothetical protein; Belongs to the DapA family. | KEGG: pca:Pcar_1903 aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.440 |
| Sros_2361 | dapB | Sros_2361 | Sros_2134 | KEGG: bja:bll4205 hypothetical protein; Belongs to the DapA family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.441 |
| Sros_2367 | Sros_2361 | Sros_2367 | Sros_2361 | Dihydrodipicolinate synthase/N-acetylneuraminate lyase-like protein; KEGG: acp:A2cp1_4217 dihydrodipicolinate synthase. | KEGG: bja:bll4205 hypothetical protein; Belongs to the DapA family. | 0.601 |
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