STRINGSTRING
Sros_2374 Sros_2374 Sros_0440 Sros_0440 Sros_1177 Sros_1177 ppc ppc purK purK Sros_1440 Sros_1440 lysA lysA Sros_1674 Sros_1674 Sros_1706 Sros_1706 Sros_2369 Sros_2369 Sros_2370 Sros_2370 Sros_4717 Sros_4717 Sros_2771 Sros_2771 pyrF pyrF Sros_2815 Sros_2815 trpC trpC Sros_3078 Sros_3078 Sros_3079 Sros_3079 Sros_3418 Sros_3418 Sros_3753 Sros_3753 Sros_4546 Sros_4546 Sros_9303 Sros_9303 panD panD Sros_9109 Sros_9109 pckG pckG Sros_8444 Sros_8444 Sros_8366 Sros_8366 Sros_8298 Sros_8298 Sros_8284 Sros_8284 Sros_7932 Sros_7932 Sros_7921 Sros_7921 Sros_7640 Sros_7640 Sros_7498 Sros_7498 cobD cobD Sros_7120 Sros_7120 hemE hemE Sros_6487 Sros_6487 Sros_6430 Sros_6430 psd psd lysA-2 lysA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_2374Metal-dependent hydrolase of the TIM-barrel fold- like protein; KEGG: geo:Geob_0101 amidohydrolase 2. (240 aa)
Sros_0440Diaminopimelate decarboxylase-like protein; KEGG: bar:GBAA1438 diaminopimelate decarboxylase. (276 aa)
Sros_1177KEGG: scl:sce6892 hypothetical protein. (474 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (879 aa)
purKPhosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (380 aa)
Sros_1440KEGG: bph:Bphy_5923 pyridoxal-dependent decarboxylase. (474 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (460 aa)
Sros_1674Hypothetical protein; KEGG: nar:Saro_0591 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase. (182 aa)
Sros_1706Malate dehydrogenase (oxaloacetate- decarboxylating); KEGG: sat:SYN_00517 NAD-dependent malic enzyme. (470 aa)
Sros_2369Metal-dependent hydrolase of the TIM-barrel fold- like protein; KEGG: ecr:ECIAI1_1930 putative metal-dependent hydrolase. (253 aa)
Sros_2370Hypothetical protein; KEGG: sal:Sala_0307 amidohydrolase 2. (276 aa)
Sros_4717Aminocarboxymuconate-semialdehyde decarboxylase; KEGG: swi:Swit_1683 amidohydrolase 2. (358 aa)
Sros_2771KEGG: scl:sce5877 putative bifunctional allantoicase/OHCU decarboxylase. (198 aa)
pyrFOrotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (237 aa)
Sros_2815Phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (413 aa)
trpCKEGG: afw:Anae109_0373 indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. (269 aa)
Sros_3078Hypothetical protein; KEGG: sal:Sala_0307 amidohydrolase 2. (253 aa)
Sros_3079Metal-dependent hydrolase of the TIM-barrel fold- like protein; KEGG: bph:Bphy_6909 amidohydrolase 2. (278 aa)
Sros_3418KEGG: dal:Dalk_0154 pyridoxal-dependent decarboxylase. (472 aa)
Sros_3753KEGG: hch:HCH_03695 diaminopimelate decarboxylase. (432 aa)
Sros_4546KEGG: aca:ACP_2295 pyridoxal-dependent decarboxylase conserved domain protein. (472 aa)
Sros_9303Amidohydrolase 2; KEGG: cak:Caul_1976 amidohydrolase 2. (398 aa)
panDAspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (142 aa)
Sros_9109KEGG: aba:Acid345_0682 tryptophan 2,3-dioxygenase. (323 aa)
pckGPhosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (614 aa)
Sros_8444Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. (159 aa)
Sros_8366KEGG: pol:Bpro_4782 Orn/DAP/Arg decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (392 aa)
Sros_8298KEGG: bha:BH3168 malic enzyme (malate dehydrogenase). (397 aa)
Sros_8284KEGG: sus:Acid_5307 alpha-ketoglutarate decarboxylase. (1241 aa)
Sros_7932KEGG: rpi:Rpic_2454 4-carboxymuconolactone decarboxylase. (132 aa)
Sros_7921Hypothetical protein; KEGG: sus:Acid_7161 amidohydrolase 2. (296 aa)
Sros_7640KEGG: bxe:Bxe_A3367 hypothetical protein. (256 aa)
Sros_7498KEGG: nar:Saro_2597 acetoacetate decarboxylase. (269 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (369 aa)
Sros_7120KEGG: spe:Spro_3049 pyridoxal-dependent decarboxylase. (466 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (345 aa)
Sros_6487KEGG: bbr:BB0554 putative carboxymuconolactone decarboxylase. (127 aa)
Sros_6430KEGG: mxa:MXAN_1379 amidohydrolase family protein. (309 aa)
psdPhosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (215 aa)
lysA-2Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (451 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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