STRINGSTRING
Sros_3085 Sros_3085 Sros_2469 Sros_2469 Sros_2373 Sros_2373 Sros_0560 Sros_0560 Sros_8847 Sros_8847 Sros_7931 Sros_7931 Sros_8026 Sros_8026 Sros_8216 Sros_8216 Sros_7609 Sros_7609 Sros_7504 Sros_7504 Sros_4608 Sros_4608
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_30855-carboxymethyl-2-hydroxymuconateDelta- isomerase; KEGG: sus:Acid_4970 5-oxopent-3-ene-1,2,5- tricarboxylate decarboxylase. (249 aa)
Sros_2469Amidohydrolase 2; KEGG: mes:Meso_1610 amidohydrolase 2. (277 aa)
Sros_2373Hypothetical protein; KEGG: sal:Sala_0307 amidohydrolase 2. (239 aa)
Sros_05605-carboxymethyl-2-hydroxymuconateDelta- isomerase; KEGG: bxe:Bxe_C0991 putative fumarylacetoacetate (FAA) hydrolase. (281 aa)
Sros_8847KEGG: rso:RS01759 fumarylacetoacetase. (378 aa)
Sros_7931KEGG: reh:H16_B2289 3-carboxy-cis,cis-muconate cyclo-isomerase. (452 aa)
Sros_8026KEGG: dvl:Dvul_2107 5-carboxymethyl-2- hydroxymuconate delta-isomerase. (258 aa)
Sros_8216KEGG: spe:Spro_0639 5-carboxymethyl-2- hydroxymuconate delta-isomerase. (281 aa)
Sros_7609KEGG: pol:Bpro_0627 protocatechuate 3,4- dioxygenase, beta subunit. (225 aa)
Sros_7504KEGG: nar:Saro_2598 5-carboxymethyl-2- hydroxymuconate delta-isomerase. (281 aa)
Sros_4608KEGG: mno:Mnod_6025 fumarylacetoacetate (FAA) hydrolase. (222 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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