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| | rpmH | KEGG: sus:Acid_1093 50S ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family. (45 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (151 aa) |
| | rpmD | KEGG: baa:BA_0711 ribosomal protein L30p/L7e. (60 aa) |
| | rpsE | Ribosomal protein S5-like protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (210 aa) |
| | rplR | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (127 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (180 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rpsZ | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (194 aa) |
| | rplX | Ribosomal protein L24-like protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (101 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (93 aa) |
| | rpmC | KEGG: bha:BH0142 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (78 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (139 aa) |
| | rpsC | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (288 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (117 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (100 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (215 aa) |
| | rplC | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (217 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | tuf | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (397 aa) |
| | fusA | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (699 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa) |
| | rplL | RplL; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (130 aa) |
| | rplJ | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (174 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (237 aa) |
| | rplK | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa) |
| | cysS | Cysteine--tRNA ligase; KEGG: gsu:GSU3365 cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (465 aa) |
| | Sros_0914 | Glutamine amidotransferase-like protein; KEGG: sal:Sala_2756 cobyric acid synthase CobQ. (238 aa) |
| | Sros_0913 | UDP-N-acetylmuramyl tripeptide synthase-like protein; KEGG: aeh:Mlg_2195 UDP-N-acetylmuramoylalanine--D- glutamate ligase. (429 aa) |
| | mltG | Periplasmic solute-binding protein-like protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (320 aa) |
| | uppP | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (279 aa) |
| | Sros_0781 | KEGG: bra:BRADO5611 putative amidase. (468 aa) |
| | murB | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. (345 aa) |
| | rpmG | KEGG: geo:Geob_3639 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (54 aa) |
| | Sros_0689 | Hypothetical protein. (378 aa) |
| | Sros_0657 | KEGG: smd:Smed_4788 glycosyl transferase family 2. (307 aa) |
| | Sros_0656 | KEGG: cak:Caul_4871 hypothetical protein. (349 aa) |
| | Sros_0651 | KEGG: bch:Bcen2424_6650 dTDP-4-dehydrorhamnose 3,5- epimerase. (187 aa) |
| | Sros_0648 | KEGG: nar:Saro_3228 hypothetical protein. (462 aa) |
| | Sros_0647 | Hypothetical protein. (253 aa) |
| | Sros_0644 | KEGG: gdj:Gdia_0731 acyltransferase 3. (397 aa) |
| | Sros_0641 | KEGG: rce:RC1_3989 polysaccharide biosynthesis protein, putative. (508 aa) |
| | Sros_0634 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (216 aa) |
| | Sros_0631 | dTDP-glucose pyrophosphorylase-like protein; KEGG: dol:Dole_1011 glucose-1-phosphate thymidylyltransferase. (355 aa) |
| | Sros_0559 | Amidase; KEGG: bja:bll7917 putative glutamyl-tRNA(Gln) amidotransferase. (461 aa) |
| | murA | UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (422 aa) |
| | Sros_0364 | KEGG: bsu:BSU13520 hypothetical protein. (348 aa) |
| | Sros_0300 | KEGG: bja:blr2369 exopolysaccharide production protein. (398 aa) |
| | Sros_0242 | KEGG: bur:Bcep18194_A4861 peptide chain release factor-like protein. (219 aa) |
| | Sros_0189 | KEGG: sun:SUN_0435 hypothetical protein. (242 aa) |
| | serS | Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (420 aa) |
| | Sros_0113 | Peptidoglycan glycosyltransferase; KEGG: geo:Geob_3477 penicillin-binding protein 2. (485 aa) |
| | infA | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (73 aa) |
| | rpmJ | KEGG: aba:Acid345_1250 LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (126 aa) |
| | rpsK | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (134 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa) |
| | rplQ | KEGG: gur:Gura_1093 50S ribosomal protein L17. (176 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (147 aa) |
| | rpsI | KEGG: dsh:Dshi_1601 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (172 aa) |
| | Sros_1186 | Acyltransferase-like protein; KEGG: bbt:BBta_5645 putative acyltransferase, group 3. (406 aa) |
| | Sros_1201 | Hypothetical protein. (277 aa) |
| | Sros_1205 | KEGG: bsu:BSU35720 CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase. (1173 aa) |
| | Sros_1210 | KEGG: bsu:BSU35720 CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase. (946 aa) |
| | trpS | Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (334 aa) |
| | Sros_1267 | KEGG: rpe:RPE_0617 protein of unknown function DUF201. (471 aa) |
| | Sros_1265 | KEGG: rce:RC1_1695 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (369 aa) |
| | Sros_1350 | Hypothetical protein. (608 aa) |
| | Sros_1357 | KEGG: geo:Geob_2969 glycosyl transferase family 2. (293 aa) |
| | Sros_1362 | Fucose 4-O-acetylase and related acetyltransferase-like protein; KEGG: mxa:MXAN_6814 acyltransferase family protein. (675 aa) |
| | Sros_1365 | KEGG: ade:Adeh_2860 hypothetical protein. (712 aa) |
| | Sros_1383 | KEGG: gme:Gmet_2884 glycosyl transferase family protein. (954 aa) |
| | prfB | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (372 aa) |
| | smpB | SmpB protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to transla [...] (155 aa) |
| | Sros_1471 | KEGG: sus:Acid_2126 hypothetical protein. (1345 aa) |
| | Sros_1472 | Hypothetical protein; KEGG: gme:Gmet_0588 TPR repeat-containing protein. (596 aa) |
| | Sros_1475 | KEGG: ara:Arad_4298 acyltransferase protein. (415 aa) |
| | prfC | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (527 aa) |
| | Sros_1636 | Hypothetical protein; KEGG: met:M446_2480 arginyl-tRNA synthetase. (218 aa) |
| | Sros_1642 | Glycosyltransferase probably involved in cell wall biogenesis-like protein; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein. (566 aa) |
| | Sros_1648 | KEGG: rpb:RPB_3840 glycosyl transferase family protein. (538 aa) |
| | rpmE | 50S ribosomal protein L31; Binds the 23S rRNA. (72 aa) |
| | prfA | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (350 aa) |
| | Sros_1662 | KEGG: scl:sce7324 glycosyltransferase. (425 aa) |
| | murI | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (276 aa) |
| | Sros_1753 | KEGG: rce:RC1_0151 hypothetical protein. (562 aa) |
| | Sros_1800 | Uncharacterized protein probably involved in trehalose biosynthesis-like protein; KEGG: rso:RS05183 hypothetical protein. (372 aa) |
| | rpsP | KEGG: eli:ELI_07475 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (153 aa) |
| | Sros_1828 | KEGG: mxa:MXAN_3546 KH domain protein; Belongs to the UPF0109 family. (80 aa) |
| | rplS | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (117 aa) |
| | rpsB | KEGG: bha:BH2427 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (317 aa) |
| | tsf | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (277 aa) |
| | frr | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (185 aa) |
| | aspS | Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily. (428 aa) |
| | proS | Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...] (580 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (1051 aa) |
| | rpsO | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | Sros_2135 | Acyltransferase 3; KEGG: mes:Meso_0485 acyltransferase 3. (646 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa) |
| | lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (612 aa) |
| | glyQS | Anticodon binding domain protein; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (461 aa) |
| | Sros_2459 | KEGG: cti:RALTA_A0587 putative lipopolysaccharide heptosyltransferase, glycosyl transferase, family 9. (398 aa) |
| | Sros_2461 | ADP-heptose:LPS heptosyltransferase-like protein; KEGG: bpt:Bpet2388 glycosyltransferase. (410 aa) |
| | Sros_2556 | Tryptophan--tRNA ligase; KEGG: aha:AHA_3183 tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (321 aa) |
| | Sros_2594 | Hypothetical protein; KEGG: swi:Swit_2804 membrane-like protein. (683 aa) |
| | lysS | Lysyl-tRNA synthetase (class II)-like protein; KEGG: lysine--tRNA ligase class II, chloroplast or mitochondrial; K04567 lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. (1098 aa) |
| | Sros_2673 | Conserved hypothetical protein; KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein. (402 aa) |
| | Sros_2812 | Hypothetical protein. (107 aa) |
| | def | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (182 aa) |
| | fmt | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (309 aa) |
| | efp | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. (186 aa) |
| | murE | UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (514 aa) |
| | murF | UDP-N-acetylmuramyl pentapeptide synthase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (465 aa) |
| | mraY | Phospho-N-acetylmuramoyl-pentapeptide-transferas e; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (352 aa) |
| | murD | UDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (465 aa) |
| | Sros_2869 | KEGG: mgm:Mmc1_0754 cell division protein FtsW; Belongs to the SEDS family. (441 aa) |
| | murG | Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (363 aa) |
| | murC | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (468 aa) |
| | ileS | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1054 aa) |
| | murA-2 | UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (438 aa) |
| | lgt | Prolipoprotein diacylglyceryltransferase-like protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (372 aa) |
| | Sros_2952 | KEGG: bsu:BSU40490 hypothetical protein. (230 aa) |
| | Sros_2968 | KEGG: dal:Dalk_0933 ribosomal protein S1. (500 aa) |
| | Sros_3224 | KEGG: atc:AGR_C_57 hypothetical protein. (139 aa) |
| | Sros_3242 | KEGG: cti:RALTA_B2096 hypothetical protein. (369 aa) |
| | Sros_3258 | KEGG: mxa:MXAN_3793 30S ribosomal protein S1. (278 aa) |
| | rpsD-2 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (204 aa) |
| | Sros_3448 | Hypothetical protein. (102 aa) |
| | Sros_3464 | KEGG: efe:EFER_0914 fused UDP-L-Ara4N formyltransferase; UDP-GlcA C-4'-decarboxylase. (315 aa) |
| | Sros_3570 | KEGG: gsu:GSU2603 30S ribosomal protein S1. (294 aa) |
| | Sros_3598 | Cysteinyl-tRNA synthetase-like protein; KEGG: spl:Spea_2684 cysteinyl-tRNA synthetase. (398 aa) |
| | Sros_3732 | KEGG: reu:Reut_B4393 glycosyl transferase family protein. (291 aa) |
| | selA | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (429 aa) |
| | Sros_3739 | KEGG: oca:OCAR_5285 selenocysteine-specific translation elongation factor. (591 aa) |
| | Sros_3923 | KEGG: nmu:Nmul_A1780 hypothetical protein. (138 aa) |
| | glyS | Glycine--tRNA ligase; KEGG: hypothetical protein; K01878 glycyl-tRNA synthetase alpha chain. (1024 aa) |
| | Sros_4298 | UDP-N-acetylmuramyl tripeptide synthase-like protein; KEGG: noc:Noc_2865 UDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate-D-alanyl-D -alanyl ligase. (411 aa) |
| | Sros_4299 | Asparaginase like protein 1-like protein; KEGG: similar to asparaginase like 1. (343 aa) |
| | Sros_4302 | Prolyl-tRNA synthetase-like protein; KEGG: Prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase. (474 aa) |
| | Sros_4411 | Hypothetical protein. (92 aa) |
| | Sros_4448 | Hypothetical protein. (149 aa) |
| | Sros_4480 | Hypothetical protein; KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein. (392 aa) |
| | Sros_4592 | Amidase; KEGG: reu:Reut_C5981 amidase; Belongs to the amidase family. (393 aa) |
| | Sros_5140 | Hypothetical protein; KEGG: hha:Hhal_2338 cytochrome c biogenesis protein, transmembrane region. (443 aa) |
| | Sros_5253 | KEGG: bxe:Bxe_A3345 hypothetical protein. (414 aa) |
| | Sros_5386 | KEGG: ccs:CCNA_02670 ABC transporter ATP-binding protein. (544 aa) |
| | Sros_5429 | Phosphoenolpyruvate synthase; KEGG: ara:Arad_3110 hypothetical protein. (230 aa) |
| | def-2 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (182 aa) |
| | Sros_5795 | KEGG: mgm:Mmc1_3425 integral membrane protein MviN. (535 aa) |
| | lnt | Apolipoprotein N-acyltransferase-like protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (547 aa) |
| | Sros_5890 | Acyltransferase 3; KEGG: pfo:Pfl01_2826 acyltransferase 3. (384 aa) |
| | def-3 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (159 aa) |
| | Sros_5972 | KEGG: aca:ACP_3071 ABC transporter, ATP-binding protein. (532 aa) |
| | Sros_5993 | Membrane protein-like protein; KEGG: aba:Acid345_3975 glycosyl transferase, family 39. (478 aa) |
| | murG-2 | Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (389 aa) |
| | Sros_6052 | KEGG: dvu:DVU3063 integral membrane protein MviN. (549 aa) |
| | Sros_6053 | KEGG: bha:BH2768 hypothetical protein. (287 aa) |
| | tyrS | Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (422 aa) |
| | pheT | Phenylalanine--tRNA ligase; KEGG: ank:AnaeK_1907 phenylalanyl-tRNA synthetase, beta subunit. (838 aa) |
| | pheS | Phenylalanine--tRNA ligase; KEGG: cja:CJA_2526 phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (365 aa) |
| | rplT | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (127 aa) |
| | rpmI | KEGG: sat:SYN_01719 50S ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family. (64 aa) |
| | infC | Translation initiation factor 3 (IF-3)-like protein; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. (222 aa) |
| | mltG-2 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (387 aa) |
| | alaS | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (890 aa) |
| | aspS-2 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (578 aa) |
| | hisS | Histidine--tRNA ligase; KEGG: noc:Noc_0902 histidyl-tRNA synthetase, class IIA. (421 aa) |
| | thrS | KEGG: mgm:Mmc1_0363 threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (659 aa) |
| | Sros_6199 | Hypothetical protein; KEGG: bbr:BB4368 putative integral membrane protein. (435 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (408 aa) |
| | Sros_6394 | 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; KEGG: bsu:BSU12880 hypothetical protein. (756 aa) |
| | Sros_6491 | dTDP-glucose pyrophosphorylase-like protein; KEGG: dvl:Dvul_2059 glucose-1-phosphate thymidylyltransferase. (355 aa) |
| | Sros_6501 | KEGG: mpt:Mpe_A0601 putative membrane protein involved in the export of O-antigen and teichoic acid. (448 aa) |
| | Sros_6504 | Hypothetical protein. (408 aa) |
| | Sros_6508 | KEGG: baa:BA_0288 glycosyl transferase. (346 aa) |
| | Sros_6509 | Non-specific protein-tyrosine kinase; KEGG: pca:Pcar_1464 uncharacterized exopolysaccharide biosynthesis protein. (454 aa) |
| | Sros_6545 | Acyltransferase 3; KEGG: mes:Meso_0485 acyltransferase 3. (675 aa) |
| | valS | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner. (845 aa) |
| | Sros_6856 | Hypothetical protein; KEGG: bra:BRADO1272 putative gas vesicle synthesis protein, GvpF/L-like. (270 aa) |
| | Sros_6951 | Acyltransferase-like protein; KEGG: rec:RHECIAT_CH0004148 putative acyltransferase protein. (435 aa) |
| | Sros_6989 | Acyltransferase-like protein; KEGG: bph:Bphy_2300 acyltransferase 3. (395 aa) |
| | Sros_7137 | KEGG: rlt:Rleg2_2501 small GTP-binding protein. (657 aa) |
| | leuS | KEGG: glo:Glov_2116 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (828 aa) |
| | Sros_7235 | KEGG: sus:Acid_5186 ABC transporter related. (543 aa) |
| | Sros_7246 | KEGG: aha:AHA_0708 hypothetical protein. (281 aa) |
| | rpmA | KEGG: mca:MCA2247 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (85 aa) |
| | rplU | 50S ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (100 aa) |
| | Sros_7279 | Peptidoglycan glycosyltransferase; KEGG: sat:SYN_00551 cell elongation specific D,D- transpeptidase. (692 aa) |
| | valS-2 | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (861 aa) |
| | def-4 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (162 aa) |
| | Sros_7330 | Amidase; KEGG: dal:Dalk_0731 amidase; Belongs to the amidase family. (477 aa) |
| | Sros_7334 | Hypothetical protein; KEGG: bcj:BCAM2165 putative beta-lactamase, class A. (317 aa) |
| | Sros_7358 | KEGG: bcs:BCAN_A1491 putative ABC transporter ATP- binding protein. (554 aa) |
| | Sros_7533 | Hypothetical protein; KEGG: dvl:Dvul_2047 isoamylase N-terminal domain- containing protein. (109 aa) |
| | rpmE2 | KEGG: dno:DNO_0417 ribosomal protein L31. (81 aa) |
| | rpmG-2 | KEGG: afr:AFE_2669 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (54 aa) |
| | Sros_7634 | D-alanyl-D-alanine carboxypeptidase-like protein; KEGG: gur:Gura_4141 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (313 aa) |
| | Sros_7654 | KEGG: mmr:Mmar10_1755 cellulose biosynthesis protein CelD. (376 aa) |
| | Sros_7656 | KEGG: mno:Mnod_6856 glycosyl transferase family 2. (313 aa) |
| | Sros_7658 | Membrane protein involved in the export of O- antigen and teichoic acid-like protein; KEGG: rle:pRL110396 putative transmembrane protein. (719 aa) |
| | Sros_7661 | KEGG: ccs:CCNA_02361 polysaccharide biosynthesis protein CelD. (363 aa) |
| | Sros_7946 | Peptidoglycan glycosyltransferase; KEGG: sat:SYN_00551 cell elongation specific D,D- transpeptidase. (487 aa) |
| | Sros_7960 | Hypothetical protein; KEGG: GK14994 gene product from transcript GK14994- RA. (175 aa) |
| | Sros_7974 | KEGG: aca:ACP_2631 GTP-binding protein TypA. (617 aa) |
| | rpmF | KEGG: dal:Dalk_3305 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (59 aa) |
| | rpmB | KEGG: aba:Acid345_0165 LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. (61 aa) |
| | ddl | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (369 aa) |
| | gltX | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (455 aa) |
| | gatB | aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (501 aa) |
| | gatA | Amidase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (496 aa) |
| | gatC | glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (99 aa) |
| | glgE | Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. (728 aa) |
| | Sros_8142 | KEGG: rce:RC1_0516 trehalose synthase. (437 aa) |
| | glgB | Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (785 aa) |
| | Sros_8227 | KEGG: hypothetical protein. (261 aa) |
| | Sros_8283 | KEGG: hypothetical protein. (235 aa) |
| | Sros_8378 | KEGG: bsu:BSU35720 CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase. (931 aa) |
| | cysS-2 | Cysteine--tRNA ligase; KEGG: bur:Bcep18194_B0590 cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (459 aa) |
| | Sros_8450 | Membrane protein-like protein; KEGG: azo:azo2381 dolichyl-phosphate-mannose- protein mannosyltransferase. (506 aa) |
| | Sros_8529 | Hypothetical protein; KEGG: Lor, RGD1559993_predicted; loricrin; K10385 loricrin. (323 aa) |
| | def-5 | Formylmethionine deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (174 aa) |
| | Sros_8590 | Uncharacterized protein involved in exopolysaccharide biosynthesis-like protein; KEGG: lch:Lcho_2366 chain length determinant protein EpsF. (425 aa) |
| | Sros_8591 | Hypothetical protein. (430 aa) |
| | Sros_8594 | KEGG: met:M446_4028 polysaccharide biosynthesis protein. (434 aa) |
| | pth | Aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (201 aa) |
| | rplY | Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (199 aa) |
| | glmU | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (483 aa) |
| | metG | tRNA synthetase class I (I, L, M and V); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (593 aa) |
| | Sros_8624 | KEGG: bba:Bd3627 hypothetical protein. (509 aa) |
| | Sros_8625 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase-like protein; KEGG: geo:Geob_0316 glycosyl transferase family 39. (520 aa) |
| | Sros_8627 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase-like protein; KEGG: mca:MCA2192 dolichyl-phosphate-mannose- protein mannosyltransferase family protein. (553 aa) |
| | Sros_8691 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit-like protein; KEGG: lpc:LPC_0215 hypothetical protein. (944 aa) |
| | glyS-2 | Glycine--tRNA ligase; KEGG: hypothetical protein; K01878 glycyl-tRNA synthetase alpha chain. (991 aa) |
| | Sros_8763 | KEGG: hypothetical protein. (303 aa) |
| | Sros_8783 | KEGG: acp:A2cp1_1498 hypothetical protein. (468 aa) |
| | Sros_8817 | Hypothetical protein; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase. (276 aa) |
| | Sros_8846 | KEGG: sus:Acid_6517 hypothetical protein. (256 aa) |
| | Sros_8848 | Conserved hypothetical protein; KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein. (402 aa) |
| | argS | Arginine--tRNA ligase; KEGG: scl:sce7660 hypothetical protein. (584 aa) |
| | Sros_8963 | KEGG: avi:Avi_7552 hypothetical protein. (318 aa) |
| | lysS-2 | KEGG: bsu:BSU00820 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (500 aa) |
| | Sros_9185 | KEGG: gur:Gura_1247 ABC transporter related. (536 aa) |
| | rplI | 50S ribosomal protein L9P; Binds to the 23S rRNA. (148 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (78 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (96 aa) |
| | Sros_9361 | KEGG: geo:Geob_0329 hypothetical protein. (373 aa) |
| | murJ | Membrane protein putative virulence factor-like protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (534 aa) |
| | ddl-2 | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (318 aa) |
