STRINGSTRING
Sros_7146 Sros_7146 Sros_6992 Sros_6992 Sros_1176 Sros_1176 Sros_3854 Sros_3854
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_7146Choline dehydrogenase; KEGG: bur:Bcep18194_C6848 glucose-methanol-choline oxidoreductase. (514 aa)
Sros_6992Choline dehydrogenase and related flavoprotein- like protein; KEGG: lch:Lcho_3191 cholesterol oxidase. (551 aa)
Sros_1176KEGG: scl:sce0787 hypothetical protein. (563 aa)
Sros_3854Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (546 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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