STRINGSTRING
Sros_0798 Sros_0798 Sros_0919 Sros_0919 gcvT gcvT Sros_3855 Sros_3855 Sros_3858 Sros_3858 Sros_3859 Sros_3859
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_0798KEGG: ret:RHE_CH00088 glycine cleavage system T protein; Belongs to the GcvT family. (822 aa)
Sros_0919LigA; KEGG: ade:Adeh_2848 LigA; Belongs to the GcvT family. (328 aa)
gcvTGlycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine. (362 aa)
Sros_3855KEGG: dimethylglycine dehydrogenase precursor; Belongs to the GcvT family. (808 aa)
Sros_3858KEGG: bmj:BMULJ_05011 sarcosine oxidase alpha subunit; Belongs to the GcvT family. (937 aa)
Sros_3859KEGG: bvi:Bcep1808_7299 sarcosine oxidase, gamma subunit. (190 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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