STRINGSTRING
Sros_9109 Sros_9109 Sros_2369 Sros_2369 Sros_3079 Sros_3079 Sros_4717 Sros_4717 Sros_6430 Sros_6430 Sros_7921 Sros_7921 Sros_9303 Sros_9303
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_9109KEGG: aba:Acid345_0682 tryptophan 2,3-dioxygenase. (323 aa)
Sros_2369Metal-dependent hydrolase of the TIM-barrel fold- like protein; KEGG: ecr:ECIAI1_1930 putative metal-dependent hydrolase. (253 aa)
Sros_3079Metal-dependent hydrolase of the TIM-barrel fold- like protein; KEGG: bph:Bphy_6909 amidohydrolase 2. (278 aa)
Sros_4717Aminocarboxymuconate-semialdehyde decarboxylase; KEGG: swi:Swit_1683 amidohydrolase 2. (358 aa)
Sros_6430KEGG: mxa:MXAN_1379 amidohydrolase family protein. (309 aa)
Sros_7921Hypothetical protein; KEGG: sus:Acid_7161 amidohydrolase 2. (296 aa)
Sros_9303Amidohydrolase 2; KEGG: cak:Caul_1976 amidohydrolase 2. (398 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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