STRINGSTRING
Sros_3449 Sros_3449 Sros_8404 Sros_8404 Sros_6334 Sros_6334 Sros_5509 Sros_5509 Sros_4854 Sros_4854 Sros_4484 Sros_4484 Sros_2953 Sros_2953 panB panB Sros_2347 Sros_2347 Sros_2099 Sros_2099 Sros_1430 Sros_1430
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_3449KEGG: sml:Smlt0232 putative isocitrate lyase. (430 aa)
Sros_8404KEGG: rru:Rru_A0217 citrate lyase; Belongs to the HpcH/HpaI aldolase family. (313 aa)
Sros_6334KEGG: met:M446_2314 citrate (pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family. (277 aa)
Sros_5509Carboxyvinyl-carboxyphosphonatephosphorylmutase; KEGG: cvi:CV_1518 carboxyvinyl-carboxyphosphonate phosphorylmutase. (273 aa)
Sros_4854KEGG: mxa:MXAN_6823 hypothetical protein; Belongs to the HpcH/HpaI aldolase family. (428 aa)
Sros_4484KEGG: bcm:Bcenmc03_3957 PEP phosphonomutase. (264 aa)
Sros_2953KEGG: mxa:MXAN_6299 pyruvate kinase; Belongs to the pyruvate kinase family. (476 aa)
panB3-methyl-2-oxobutanoatehydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (281 aa)
Sros_2347KEGG: bba:Bd1150 pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (880 aa)
Sros_2099KEGG: scl:sce5882 hypothetical protein. (390 aa)
Sros_1430Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (560 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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