STRINGSTRING
Sros_8255 Sros_8255 xylA xylA Sros_2249 Sros_2249 Sros_2490 Sros_2490 Sros_4521 Sros_4521 Sros_5562 Sros_5562 Sros_6726 Sros_6726 Sros_8495 Sros_8495 Sros_9139 Sros_9139 Sros_9147 Sros_9147
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_8255KEGG: vei:Veis_3268 xylose isomerase domain- containing protein. (335 aa)
xylAKEGG: aba:Acid345_0903 xylose isomerase; Belongs to the xylose isomerase family. (383 aa)
Sros_2249Sugar phosphate isomerase/epimerase-like protein; KEGG: ara:Arad_0239 hypothetical protein. (263 aa)
Sros_2490KEGG: sus:Acid_1484 xylose isomerase domain- containing protein. (292 aa)
Sros_4521Sugar phosphate isomerase/epimerase-like protein; KEGG: eta:ETA_32860 myo-inositol catabolism protein (2-keto-myo-inositol dehydratase). (296 aa)
Sros_5562Myo-inosose-2 dehydratase; KEGG: bam:Bamb_1309 xylose isomerase domain- containing protein. (281 aa)
Sros_6726KEGG: ret:RHE_CH00078 putative endonuclease protein. (285 aa)
Sros_8495Myo-inosose-2 dehydratase; KEGG: kpe:KPK_2564 AP endonuclease, family 2. (311 aa)
Sros_9139Sugar phosphate isomerase/epimerase-like protein; KEGG: glo:Glov_2906 xylose isomerase domain protein TIM barrel. (270 aa)
Sros_9147KEGG: pen:PSEEN2637 hypothetical protein. (316 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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