(7 nodes) ATP-grasp domain network (Streptosporangium roseum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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co-expression

protein homology

Your Input:
	Sros_6412	KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit. (656 aa)
	carB	KEGG: geo:Geob_3271 carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. (1097 aa)
	purK	Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (380 aa)
	ddl-2	D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (318 aa)
	Sros_1299	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding. (579 aa)
	Sros_6358	KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding. (667 aa)
	Sros_3798	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding. (583 aa)

Your Current Organism:

Streptosporangium roseum

NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Sros_1299	Sros_3798	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	0.900
Sros_1299	Sros_6358	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.	0.911
Sros_1299	Sros_6412	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.	0.912
Sros_3798	Sros_1299	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	0.900
Sros_3798	Sros_6358	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.	0.911
Sros_3798	Sros_6412	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.	0.912
Sros_6358	Sros_1299	KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	0.911
Sros_6358	Sros_3798	KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	0.911
Sros_6358	Sros_6412	KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.	KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.	0.908
Sros_6412	Sros_1299	KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	0.912
Sros_6412	Sros_3798	KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.	KEGG: dac:Daci_5726 carbamoyl-phosphate synthase L chain ATP-binding.	0.912
Sros_6412	Sros_6358	KEGG: rru:Rru_A1941 3-methylcrotonoyl-CoA carboxylase, alpha subunit.	KEGG: xau:Xaut_1855 carbamoyl-phosphate synthase L chain ATP-binding.	0.908

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