STRINGSTRING
Sros_1719 Sros_1719 Sros_7554 Sros_7554 Sros_7074 Sros_7074 Sros_6926 Sros_6926 Sros_6788 Sros_6788 Sros_6530 Sros_6530 Sros_6200 Sros_6200 Sros_5980 Sros_5980 Sros_5856 Sros_5856 Sros_5632 Sros_5632 uvrB uvrB Sros_0493 Sros_0493 Sros_0368 Sros_0368 Sros_7832 Sros_7832 Sros_7833 Sros_7833 Sros_7838 Sros_7838 Sros_8000 Sros_8000 Sros_8393 Sros_8393 mfd mfd Sros_8690 Sros_8690 Sros_8756 Sros_8756 Sros_8907 Sros_8907
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_1719DNA or RNA helicase of superfamily II-like protein; KEGG: sde:Sde_1925 GGDEF family protein. (582 aa)
Sros_7554HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1072 aa)
Sros_7074KEGG: maq:Maqu_0559 ATP-dependent DNA helicase RecQ. (689 aa)
Sros_6926KEGG: bav:BAV2781 ATP-dependent DNA helicase. (628 aa)
Sros_6788KEGG: mxa:MXAN_7274 SNF2/helicase domain protein. (1040 aa)
Sros_6530KEGG: mxa:MXAN_6717 putative ATP-dependent helicase. (674 aa)
Sros_6200KEGG: scl:sce4364 putative ATP-dependent helicase. (830 aa)
Sros_5980KEGG: xau:Xaut_3204 DEAD/DEAH box helicase domain- containing protein. (571 aa)
Sros_5856KEGG: probable nuclear exosomal RNA helicase MTR4; K01529. (909 aa)
Sros_5632KEGG: sus:Acid_0740 ATP-dependent DNA helicase RecQ. (545 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (711 aa)
Sros_0493KEGG: dvl:Dvul_2723 DEAD/DEAH box helicase domain- containing protein. (815 aa)
Sros_0368KEGG: scl:sce0700 ATP-independent RNA helicase; Belongs to the DEAD box helicase family. (561 aa)
Sros_7832KEGG: mgm:Mmc1_2016 helicase domain protein. (941 aa)
Sros_7833KEGG: mgm:Mmc1_2015 DEAD/DEAH box helicase domain protein. (1723 aa)
Sros_7838KEGG: hch:HCH_03463 Lhr-like helicase. (694 aa)
Sros_8000KEGG: tgr:Tgr7_3183 ATP-dependent DNA helicase RecG. (723 aa)
Sros_8393Hypothetical protein; KEGG: proteophosphoglycan ppg4; Belongs to the DEAD box helicase family. (697 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1204 aa)
Sros_8690KEGG: scl:sce8204 putative helicase. (469 aa)
Sros_8756KEGG: ade:Adeh_3869 type III restriction enzyme, res subunit. (1028 aa)
Sros_8907KEGG: hypothetical protein; K10843 DNA excision repair protein ERCC-3. (548 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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