STRINGSTRING
Sros_0778 Sros_0778 Sros_1344 Sros_1344 Sros_1498 Sros_1498 Sros_2368 Sros_2368 Sros_2411 Sros_2411 Sros_5741 Sros_5741 Sros_6218 Sros_6218 Sros_6712 Sros_6712 Sros_7323 Sros_7323 Sros_7969 Sros_7969 Sros_8210 Sros_8210 Sros_9336 Sros_9336
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sros_0778KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family. (474 aa)
Sros_1344KEGG: swi:Swit_4534 UDP-glucose 6-dehydrogenase. (439 aa)
Sros_1498KEGG: csa:Csal_2487 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. (291 aa)
Sros_2368KEGG: swi:Swit_4534 UDP-glucose 6-dehydrogenase. (441 aa)
Sros_2411KEGG: smd:Smed_3610 carbohydrate kinase FGGY; Belongs to the FGGY kinase family. (511 aa)
Sros_5741KEGG: dal:Dalk_2461 mandelate racemase/muconate lactonizing protein. (386 aa)
Sros_6218KEGG: aha:AHA_1901 L-ribulose-5-phosphate 4- epimerase. (215 aa)
Sros_6712KEGG: swi:Swit_2088 aldehyde dehydrogenase (acceptor). (479 aa)
Sros_7323KEGG: bxe:Bxe_A1944 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (469 aa)
Sros_7969KEGG: bur:Bcep18194_B1170 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)
Sros_8210Oxidoreductase; KEGG: bja:blr1124 oxidoreductase. (314 aa)
Sros_9336Gluconolactonase; KEGG: mlo:mll4328 gluconolactonase. (299 aa)
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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